Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error rsID rsID_ref_var_alleles CAF normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumor_var_reads tumor_vaf normal_ref_reads_val normal_var_reads_val normal_vaf_val tumor_ref_reads_val tumor_var_reads_val tumor_vaf_val KCNN2 0 genome.wustl.edu 37 5 113698628 113698628 + Silent SNP C C T TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 5 113698628 113698628 C T SNP KCNN2 ENST00000264773 human ensembl 74_37 1 known silent c.156 p.A52 0.001 NULL pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK 0 no_errors 0 0 0 26 0 0 12 4 25 29 0 0.00 6 0 0.00 DSCR9 0 genome.wustl.edu 37 21 38593436 38593436 + RNA SNP C C T TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 21 38593436 38593436 C T SNP DSCR9 ENST00000454482 human ensembl 74_37 1 known rna NULL NULL 0.005 0 0 0 no_errors 0 0 0 48 0 0 34 4 10.53 26 0 0.00 10 0 0.00 TMEM63B 0 genome.wustl.edu 37 6 44119717 44119718 + Frame_Shift_Del DEL CG CG - TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 CG CG Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 6 44119717 44119718 CG 0 DEL TMEM63B ENST00000259746 human ensembl 74_37 1 known frame_shift_del c.1808_1809 p.S603fs 1.000:0.107 pfam_DUF221 pfam_DUF221 0 no_errors 0 0 0 21 0 0 3 2 40 21 0 0.00 10 0 0.00 NPIPB5 0 genome.wustl.edu 37 16 22545618 22545629 + In_Frame_Del DEL TCCACCCTCAGC TCCACCCTCAGC - TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 TCCACCCTCAGC TCCACCCTCAGC Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 16 22545618 22545629 TCCACCCTCAGC 0 DEL NPIPB5 ENST00000424340 human ensembl 74_37 1 known in_frame_del c.1314_1325 p.APPS442in_frame_del 0.997:0.996:0.997:0.997:0.997:0.998:0.998:0.998:0.998:0.997:0.995:0.995 NULL NULL 0 no_errors rs375731759 TTCCACCCTCAGC->T 0 13 0 0 16 10 38.46 0 0 0.00 0 0 0.00 MBD2 0 genome.wustl.edu 37 18 51750584 51750585 + In_Frame_Ins INS - - GCC TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 18 51750584 51750585 0 GCC INS MBD2 ENST00000256429 human ensembl 74_37 -1 known in_frame_ins c.346_345 p.115in_frame_insG 0.957:0.926 NULL pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd 0 no_errors 0 0 0 8 0 0 3 3 50 0 0 0.00 0 0 0.00 RASL10A 0 genome.wustl.edu 37 22 29709353 29709354 + Frame_Shift_Del DEL GC GC - TCGA-3G-AB0O-01A-22D-A423-09 TCGA-3G-AB0O-11A-31D-A426-09 GC GC Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq e3b2eeb9-85d3-4041-bc3e-570d8b3fa2f2 e078ce0f-d012-456b-8c5e-378ea096f725 22 29709353 29709354 GC 0 DEL RASL10A ENST00000216101 human ensembl 74_37 -1 known frame_shift_del c.549_548 p.R183fs 0.996:0.997 NULL pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase 0 no_errors 0 0 0 22 0 0 19 2 9.52 5 0 0.00 9 0 0.00