Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
MT-RNR2	0	genome.wustl.edu	37	MT	2333	2333	+	RNA	SNP	G	G	A			TCGA-X7-A8DB-01A-11D-A423-09	TCGA-X7-A8DB-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d311cd3f-0886-4912-a8a9-76b2cc2b077c	ea15d2b0-9a1f-4d6f-84c6-230afd6f0dd1	MT	2333	2333	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	1	known	rna	NULL	NULL	NULL	0	0	0	no_errors	0	0	0	307	1	0.32	55	38	40.86	8	0	0.00	1	0	0.00
MT-ND6	0	genome.wustl.edu	37	MT	14462	14462	+	Missense_Mutation	SNP	G	G	A			TCGA-X7-A8DB-01A-11D-A423-09	TCGA-X7-A8DB-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d311cd3f-0886-4912-a8a9-76b2cc2b077c	ea15d2b0-9a1f-4d6f-84c6-230afd6f0dd1	MT	14462	14462	G	A	SNP	MT-ND6	ENST00000361681	human	ensembl	74_37	-1	known	missense	c.212	p.T71M	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	0	no_errors	0	0	0	305	0	0	54	44	44.9	7	0	0.00	0	0	0.00
LOC101930102	0	genome.wustl.edu	37	X	3761439	3761439	+	Missense_Mutation	SNP	G	G	A			TCGA-X7-A8DB-01A-11D-A423-09	TCGA-X7-A8DB-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d311cd3f-0886-4912-a8a9-76b2cc2b077c	ea15d2b0-9a1f-4d6f-84c6-230afd6f0dd1	X	3761439	3761439	G	A	SNP	LOC101930102	ENST00000425492	human	ensembl	74_37	-1	putative	missense	c.85	p.R29W	0.023	NULL	NULL	0	no_errors	0	0	0	28	0	0	25	4	13.79	5	0	0.00	7	0	0.00
EPS8L1	0	genome.wustl.edu	37	19	55598164	55598164	+	Frame_Shift_Del	DEL	C	C	-			TCGA-X7-A8DB-01A-11D-A423-09	TCGA-X7-A8DB-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d311cd3f-0886-4912-a8a9-76b2cc2b077c	ea15d2b0-9a1f-4d6f-84c6-230afd6f0dd1	19	55598164	55598164	C	0	DEL	EPS8L1	ENST00000201647	human	ensembl	74_37	1	known	frame_shift_del	c.1860	p.P621fs	0.001	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_SH3_domain	0	no_errors	0	0	0	12	0	0	4	2	33.33	4	0	0.00	8	0	0.00