Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
ELOVL5	0	genome.wustl.edu	37	6	53138103	53138103	+	Missense_Mutation	SNP	A	A	C			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	6	53138103	53138103	A	C	SNP	ELOVL5	ENST00000541407	human	ensembl	74_37	-1	known	missense	c.617	p.L206R	1	pfam_GNS1_SUR4	pfam_GNS1_SUR4	0	no_errors	0	0	0	86	0	0	75	12	13.79	251	0	0.00	304	57	15.75
GTF2I	0	genome.wustl.edu	37	7	74146970	74146970	+	Missense_Mutation	SNP	T	T	A			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	7	74146970	74146970	T	A	SNP	GTF2I	ENST00000324896	human	ensembl	74_37	1	known	missense	c.1271	p.L424H	1	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	0	no_errors	0	0	0	304	0	0	355	32	8.27	117	0	0.00	171	17	9.04
OR2D2	0	genome.wustl.edu	37	11	6913662	6913662	+	Missense_Mutation	SNP	C	C	T			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	11	6913662	6913662	C	T	SNP	OR2D2	ENST00000299459	human	ensembl	74_37	-1	known	missense	c.70	p.E24K	0.06	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	0	no_errors	0	0	0	32	0	0	35	8	18.6	199	0	0.00	291	19	6.13
DDX10	0	genome.wustl.edu	37	11	108593732	108593732	+	Missense_Mutation	SNP	G	G	T			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	11	108593732	108593732	G	T	SNP	DDX10	ENST00000322536	human	ensembl	74_37	1	known	missense	c.1508	p.G503V	1	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	0	no_errors	0	0	0	67	0	0	57	10	14.93	183	0	0.00	225	28	11.07
HECTD1	0	genome.wustl.edu	37	14	31582558	31582558	+	Missense_Mutation	SNP	C	C	G			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	14	31582558	31582558	C	G	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	missense	c.5989	p.V1997L	1	NULL	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	0	no_errors	0	0	0	104	1	0.95	110	12	9.84	246	0	0.00	273	23	7.77
ENSG00000214719	0	genome.wustl.edu	37	17	28961296	28961296	+	RNA	SNP	C	C	T			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	17	28961296	28961296	C	T	SNP	ENSG00000214719	ENST00000398849	human	ensembl	74_37	1	known	rna	NULL	NULL	0.001	0	0	0	no_errors	0	0	0	24	0	0	40	4	9.09	36	0	0.00	53	3	5.36
RIN2	0	genome.wustl.edu	37	20	19941396	19941396	+	Missense_Mutation	SNP	G	G	A			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	20	19941396	19941396	G	A	SNP	RIN2	ENST00000255006	human	ensembl	74_37	1	known	missense	c.551	p.R184H	1	pfscan_SH2	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	0	no_errors	rs200460217	G->A	0	86	0	0	62	6	8.82	253	1	0.39	314	15	4.53
DNAH14	0	genome.wustl.edu	37	1	225157363	225157363	+	RNA	SNP	C	C	T			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	1	225157363	225157363	C	T	SNP	DNAH14	ENST00000453375	human	ensembl	74_37	1	known	rna	NULL	NULL	0.035	0	0	0	no_errors	0	0	0	25	0	0	33	4	10.81	0	0	0.00	2	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102295660	102295660	+	RNA	SNP	C	C	T			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	15	102295660	102295660	C	T	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	1	known	rna	NULL	NULL	0.993	0	0	0	no_errors	rs202005284	C->T	0	22	0	0	14	6	30	8	0	0.00	2	0	0.00
MAST4	0	genome.wustl.edu	37	5	65892669	65892671	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	5	65892669	65892671	GCC	0	DEL	MAST4	ENST00000404260	human	ensembl	74_37	1	known	in_frame_del	c.186_188	p.P66in_frame_del	0.182:0.176:0.146	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	14	0	0	12	2	14.29	12	0	0.00	9	0	0.00
ENSG00000216113	0	genome.wustl.edu	37	8	104863873	104863876	+	RNA	DEL	ACAC	ACAC	-			TCGA-X7-A8DC-01A-11D-A423-09	TCGA-X7-A8DC-10A-01D-A426-09	ACAC	ACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	239598a0-27b2-44c2-8a2d-dae8041a8ba3	6f72bc55-ba4b-4bf1-9e48-f2a4de068979	8	104863873	104863876	ACAC	0	DEL	ENSG00000216113	ENST00000401294	human	ensembl	74_37	1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000	0	0	0	no_errors	rs59712615	TACAC->T	0	12	0	0	21	6	22.22	0	0	0.00	0	0	0.00