Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
AK5	0	genome.wustl.edu	37	1	77876675	77876675	+	Missense_Mutation	SNP	G	G	A			TCGA-X7-A8DI-01A-11D-A423-09	TCGA-X7-A8DI-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	c6f718ae-772d-43b5-8855-2c44b375d61e	8a785b6e-4abe-4c94-8e68-55b39e06c0b5	1	77876675	77876675	G	A	SNP	AK5	ENST00000354567	human	ensembl	74_37	1	known	missense	c.901	p.D301N	1	superfamily_P-loop_NTPase	pfam_Adenylate_kin,pfam_Dpy-30_motif,superfamily_P-loop_NTPase,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin,tigrfam_Adenylate_kin1	0	no_errors	0	0	0	53	0	0	74	6	7.5	325	0	0.00	180	14	7.22
CCNL1	0	genome.wustl.edu	37	3	156876755	156876755	+	Missense_Mutation	SNP	T	T	C			TCGA-X7-A8DI-01A-11D-A423-09	TCGA-X7-A8DI-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	c6f718ae-772d-43b5-8855-2c44b375d61e	8a785b6e-4abe-4c94-8e68-55b39e06c0b5	3	156876755	156876755	T	C	SNP	CCNL1	ENST00000295926	human	ensembl	74_37	-1	known	missense	c.388	p.M130V	1	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	0	no_errors	0	0	0	32	0	0	57	7	10.94	376	0	0.00	220	14	5.96
UGT2B4	0	genome.wustl.edu	37	4	70361046	70361046	+	Silent	SNP	G	G	A			TCGA-X7-A8DI-01A-11D-A423-09	TCGA-X7-A8DI-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	c6f718ae-772d-43b5-8855-2c44b375d61e	8a785b6e-4abe-4c94-8e68-55b39e06c0b5	4	70361046	70361046	G	A	SNP	UGT2B4	ENST00000305107	human	ensembl	74_37	-1	known	silent	c.534	p.Y178	0	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	0	no_errors	rs370531105	G->A	0	51	0	0	67	7	9.46	238	0	0.00	173	14	7.45
GTF2I	0	genome.wustl.edu	37	7	74146970	74146970	+	Missense_Mutation	SNP	T	T	A			TCGA-X7-A8DI-01A-11D-A423-09	TCGA-X7-A8DI-10A-01D-A426-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	c6f718ae-772d-43b5-8855-2c44b375d61e	8a785b6e-4abe-4c94-8e68-55b39e06c0b5	7	74146970	74146970	T	A	SNP	GTF2I	ENST00000324896	human	ensembl	74_37	1	known	missense	c.1271	p.L424H	1	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	0	no_errors	0	0	0	309	0	0	415	37	8.19	204	0	0.00	130	7	5.04
CDH20	0	genome.wustl.edu	37	18	59206323	59206323	+	Missense_Mutation	SNP	C	C	A			TCGA-X7-A8DI-01A-11D-A423-09	TCGA-X7-A8DI-10A-01D-A426-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	c6f718ae-772d-43b5-8855-2c44b375d61e	8a785b6e-4abe-4c94-8e68-55b39e06c0b5	18	59206323	59206323	C	A	SNP	CDH20	ENST00000262717	human	ensembl	74_37	1	known	missense	c.1475	p.P492Q	1	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	0	no_errors	0	0	0	105	0	0	106	12	10.17	337	0	0.00	238	16	6.30