Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error rsID rsID_ref_var_alleles CAF normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumor_var_reads tumor_vaf normal_ref_reads_val normal_var_reads_val normal_vaf_val tumor_ref_reads_val tumor_var_reads_val tumor_vaf_val UBQLN2 0 genome.wustl.edu 37 X 56590760 56590760 + Missense_Mutation SNP G G C TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G C G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 56590760 56590760 G C SNP UBQLN2 ENST00000338222 human ensembl 74_37 1 known missense c.454 p.A152P 1 NULL pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup 0 no_errors 0 0 0 17 0 0 21 5 19.23 51 0 0.00 53 6 10.17 MAGEA3 0 genome.wustl.edu 37 X 151935507 151935507 + Missense_Mutation SNP T T A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 151935507 151935507 T A SNP MAGEA3 ENST00000370278 human ensembl 74_37 -1 known missense c.660 p.K220N 0 pfam_MAGE,pfscan_MAGE pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE 0 no_errors 0 0 0 67 0 0 42 16 27.59 47 0 0.00 25 28 52.83 EXOSC10 0 genome.wustl.edu 37 1 11158195 11158195 + Missense_Mutation SNP C C A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 1 11158195 11158195 C A SNP EXOSC10 ENST00000376936 human ensembl 74_37 -1 known missense c.130 p.V44L 1 pfam_Exosome-assoc_fac_Rrp6_N pfam_3'-5'_exonuclease_dom,pfam_Exosome-assoc_fac_Rrp6_N,pfam_HRDC_dom,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_HRDC_dom,pfscan_HRDC_dom 0 no_errors 0 0 0 49 0 0 46 17 26.98 240 0 0.00 219 45 17.05 PADI3 0 genome.wustl.edu 37 1 17592171 17592171 + Missense_Mutation SNP G G T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 1 17592171 17592171 G T SNP PADI3 ENST00000375460 human ensembl 74_37 1 known missense c.364 p.D122Y 0.998 pfam_Prot_Arg_deaminase_cen_dom,superfamily_Prot_Arg_deaminase_cen_dom,pirsf_Protein-arginine_deiminase_sub pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub 0 no_errors 0 0 0 43 0 0 36 8 18.18 167 0 0.00 176 33 15.79 IPP 0 genome.wustl.edu 37 1 46165728 46165728 + Silent SNP T T A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 1 46165728 46165728 T A SNP IPP ENST00000396478 human ensembl 74_37 -1 known silent c.1665 p.S555 0.921 pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like 0 no_errors 0 0 0 84 0 0 87 8 8.42 209 0 0.00 213 21 8.97 TP53BP2 0 genome.wustl.edu 37 1 224002053 224002053 + Missense_Mutation SNP G G A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 1 224002053 224002053 G A SNP TP53BP2 ENST00000343537 human ensembl 74_37 -1 known missense c.178 p.R60C 1 NULL pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3 0 no_errors 0 0 0 75 0 0 41 9 18 246 1 0.40 225 56 19.86 ATG7 0 genome.wustl.edu 37 3 11383645 11383645 + Silent SNP G G T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 3 11383645 11383645 G T SNP ATG7 ENST00000354449 human ensembl 74_37 1 known silent c.1017 p.L339 1 tigrfam_Atg7 pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_Atg7 0 no_errors 0 0 0 86 0 0 79 21 21 237 1 0.42 201 43 17.62 ATG7 0 genome.wustl.edu 37 3 11383646 11383646 + Missense_Mutation SNP A A T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 A A A T A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 3 11383646 11383646 A T SNP ATG7 ENST00000354449 human ensembl 74_37 1 known missense c.1018 p.M340L 1 tigrfam_Atg7 pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_Atg7 0 no_errors 0 0 0 84 0 0 79 20 20.2 236 0 0.00 199 43 17.77 LRRFIP2 0 genome.wustl.edu 37 3 37154409 37154409 + Silent SNP T T A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 3 37154409 37154409 T A SNP LRRFIP2 ENST00000336686 human ensembl 74_37 -1 known silent c.435 p.L145 0.005 NULL pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin 0 no_errors 0 0 0 73 0 0 60 7 10.45 155 0 0.00 221 44 16.60 ENSG00000206902 0 genome.wustl.edu 37 3 53324764 53324764 + RNA SNP T T C TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 3 53324764 53324764 T C SNP ENSG00000206902 ENST00000384175 human ensembl 74_37 1 novel rna NULL NULL 0.001 0 0 0 no_errors 0 0 0 23 0 0 11 4 23.53 47 0 0.00 34 5 12.20 PLEKHG4B 0 genome.wustl.edu 37 5 174164 174164 + Nonsense_Mutation SNP G G A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 5 174164 174164 G A SNP PLEKHG4B ENST00000283426 human ensembl 74_37 1 known nonsense c.3285 p.W1095* 1 smart_Pleckstrin_homology,pfscan_Pleckstrin_homology pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain 0 no_errors 0 0 0 27 0 0 38 5 11.63 72 0 0.00 104 8 7.14 GPR116 0 genome.wustl.edu 37 6 46849840 46849840 + Missense_Mutation SNP C C T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 6 46849840 46849840 C T SNP GPR116 ENST00000265417 human ensembl 74_37 -1 known missense c.617 p.R206Q 0.295 pfam_SEA_dom pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like 0 no_errors rs371340398 C->T 0 113 0 0 79 8 8.99 272 0 0.00 250 15 5.64 HCRTR2 0 genome.wustl.edu 37 6 55039563 55039563 + Missense_Mutation SNP G G T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 6 55039563 55039563 G T SNP HCRTR2 ENST00000370862 human ensembl 74_37 1 known missense c.178 p.G60W 0.997 prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfam_Orexin_rcpt_2,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_2,prints_NPY_rcpt 0 no_errors 0 0 0 65 0 0 74 20 21.28 197 1 0.51 166 51 23.50 NOD1 0 genome.wustl.edu 37 7 30491267 30491267 + Missense_Mutation SNP T T C TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 7 30491267 30491267 T C SNP NOD1 ENST00000222823 human ensembl 74_37 -1 known missense c.1766 p.N589S 1 NULL pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD 0 no_errors rs138046644 T->C 0 42 1 2.27 44 4 8.33 156 0 0.00 160 12 6.94 GTF2I 0 genome.wustl.edu 37 7 74146970 74146970 + Missense_Mutation SNP T T A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 7 74146970 74146970 T A SNP GTF2I ENST00000324896 human ensembl 74_37 1 known missense c.1271 p.L424H 1 pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I 0 no_errors 0 0 0 419 0 0 342 76 18.14 103 0 0.00 121 19 13.57 ABHD17B 0 genome.wustl.edu 37 9 74481855 74481855 + Missense_Mutation SNP C C A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 9 74481855 74481855 C A SNP ABHD17B ENST00000377041 human ensembl 74_37 -1 known missense c.715 p.D239Y 1 pfam_Peptidase_S9,pfam_Dienelactn_hydro pfam_Peptidase_S9,pfam_Dienelactn_hydro 0 no_errors 0 0 0 54 0 0 62 8 11.43 210 1 0.47 197 14 6.64 PHRF1 0 genome.wustl.edu 37 11 609650 609650 + Silent SNP C C T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 11 609650 609650 C T SNP PHRF1 ENST00000264555 human ensembl 74_37 1 known silent c.4194 p.A1398 0.046 NULL pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING 0 no_errors 0 0 0 34 0 0 30 6 16.67 72 0 0.00 51 11 17.74 PLEKHA7 0 genome.wustl.edu 37 11 16809631 16809631 + RNA SNP A A G TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 11 16809631 16809631 A G SNP PLEKHA7 ENST00000332954 human ensembl 74_37 -1 known rna NULL NULL 0 0 0 0 no_errors 0 0 0 34 0 0 16 5 23.81 187 0 0.00 232 58 20.00 ATG13 0 genome.wustl.edu 37 11 46671828 46671828 + Missense_Mutation SNP T T G TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T G T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 11 46671828 46671828 T G SNP ATG13 ENST00000312040 human ensembl 74_37 1 known missense c.419 p.L140R 1 pfam_Autophagy-rel_p13 pfam_Autophagy-rel_p13 0 no_errors 0 0 0 60 0 0 51 4 7.27 220 0 0.00 211 13 5.80 GRIA4 0 genome.wustl.edu 37 11 105623710 105623710 + Missense_Mutation SNP G G A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 11 105623710 105623710 G A SNP GRIA4 ENST00000282499 human ensembl 74_37 1 known missense c.251 p.C84Y 1 pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt 0 no_errors rs557011356 G->A 0.9998,0.0001997 55 0 0 40 5 11.11 216 0 0.00 262 21 7.42 DYRK4 0 genome.wustl.edu 37 12 4714232 4714232 + Nonsense_Mutation SNP C C T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 12 4714232 4714232 C T SNP DYRK4 ENST00000010132 human ensembl 74_37 1 known nonsense c.934 p.Q312* 1 pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom 0 no_errors 0 0 0 24 0 0 14 8 36.36 126 0 0.00 124 26 17.33 OLFM4 0 genome.wustl.edu 37 13 53608550 53608550 + Missense_Mutation SNP A A G TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 13 53608550 53608550 A G SNP OLFM4 ENST00000219022 human ensembl 74_37 1 known missense c.272 p.D91G 0.839 NULL pfam_Olfac-like,superfamily_Quinoprot_gluc/sorb_DH,smart_Olfac-like,pfscan_Olfac-like 0 no_errors 0 0 0 63 0 0 44 19 30.16 234 0 0.00 179 38 17.51 GPRC5B 0 genome.wustl.edu 37 16 19883616 19883616 + Silent SNP G G A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 16 19883616 19883616 G A SNP GPRC5B ENST00000537135 human ensembl 74_37 -1 known silent c.630 p.T210 0.033 pfam_GPCR_3_C,pfscan_GPCR_3_C pfam_GPCR_3_C,pfscan_GPCR_3_C 0 no_errors 0 0 0 34 0 0 59 5 7.81 46 0 0.00 56 9 13.85 CTCF 0 genome.wustl.edu 37 16 67670755 67670755 + Splice_Site SNP G G T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G G T G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 16 67670755 67670755 G T SNP CTCF ENST00000264010 human ensembl 74_37 1 known splice_site c.1999+1 e9+1 1 0 0 0 no_errors 0 0 0 38 0 0 41 11 21.15 186 0 0.00 154 28 15.38 MYO15B 0 genome.wustl.edu 37 17 73590629 73590629 + RNA SNP C C T TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 17 73590629 73590629 C T SNP MYO15B ENST00000578382 human ensembl 74_37 1 known rna NULL NULL 0.994 0 0 0 no_errors 0 0 0 33 0 0 35 10 22.22 42 0 0.00 42 13 23.64 RYR1 0 genome.wustl.edu 37 19 38954458 38954458 + Missense_Mutation SNP C C A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 19 38954458 38954458 C A SNP RYR1 ENST00000359596 human ensembl 74_37 1 known missense c.2754 p.N918K 1 pfam_Ryanodine_rcpt pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif 0 no_errors 0 0 0 20 0 0 13 6 30 58 0 0.00 67 12 15.19 ZNF544 0 genome.wustl.edu 37 19 58773097 58773097 + Silent SNP T T G TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T G T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 19 58773097 58773097 T G SNP ZNF544 ENST00000269829 human ensembl 74_37 1 known silent c.1125 p.T375 0.92 pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box 0 no_errors 0 0 0 65 0 0 38 15 28.3 177 0 0.00 224 39 14.77 EPB41L1 0 genome.wustl.edu 37 20 34773175 34773175 + Missense_Mutation SNP A A G TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 20 34773175 34773175 A G SNP EPB41L1 ENST00000338074 human ensembl 74_37 1 known missense c.703 p.N235D 1 pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like 0 no_errors 0 0 0 22 0 0 13 3 18.75 60 0 0.00 66 11 14.29 BCOR 0 genome.wustl.edu 37 X 39911577 39911583 + Frame_Shift_Del DEL GAAAATT GAAAATT - TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 GAAAATT GAAAATT GAAAATT - GAAAATT GAAAATT Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 39911577 39911583 GAAAATT 0 DEL BCOR ENST00000378444 human ensembl 74_37 -1 known frame_shift_del c.5053_5047 p.N1683fs 1.000:1.000:1.000:1.000:0.998:1.000:1.000 NULL pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom 0 no_errors 0 0 0 66 0 0 47 7 12.96 152 0 0.00 98 14 12.50 BCOR 0 genome.wustl.edu 37 X 39911586 39911589 + Frame_Shift_Del DEL AGCG AGCG - TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 AGCG AGCG AGCG - AGCG AGCG Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 39911586 39911589 AGCG 0 DEL BCOR ENST00000378444 human ensembl 74_37 -1 known frame_shift_del c.5044_5041 p.R1681fs 0.998:0.995:1.000:1.000 NULL pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom 0 no_errors 0 0 0 64 0 0 38 7 15.56 146 0 0.00 89 14 13.59 USP9X 0 genome.wustl.edu 37 X 40996178 40996178 + Frame_Shift_Del DEL T T - TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T T - T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 40996178 40996178 T 0 DEL USP9X ENST00000324545 human ensembl 74_37 1 known frame_shift_del c.557 p.I186fs 1 NULL pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67 0 no_errors 0 0 0 66 0 0 50 21 29.58 130 0 0.00 91 51 35.92 HRAS 0 genome.wustl.edu 37 11 534284 534285 + In_Frame_Ins INS - - CCG TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 - - - CCG - - Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 11 534284 534285 0 CCG INS HRAS ENST00000311189 human ensembl 74_37 -1 known in_frame_ins c.39_38 p.14in_frame_insG 0.990:1.000 pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom 0 no_errors 0 0 0 40 0 0 43 9 17.31 118 0 0.00 90 11 10.89 BZRAP1-AS1 0 genome.wustl.edu 37 17 56429513 56429515 + RNA DEL AAC AAC - TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 AAC AAC AAC - AAC AAC Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 17 56429513 56429515 AAC 0 DEL BZRAP1-AS1 ENST00000578025 human ensembl 74_37 1 known rna NULL NULL 0.002:0.000:0.004 0 0 0 no_errors 0 0 0 31 0 0 37 9 19.57 147 0 0.00 93 27 22.50 WASH6P 0 genome.wustl.edu 37 X 155252510 155252510 + RNA SNP T T C TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff X 155252510 155252510 T C SNP WASH6P ENST00000461007 human ensembl 74_37 1 known rna NULL NULL 0.054 0 0 0 no_errors 0 0 0 37 0 0 45 9 16.67 0 0 0.00 0 0 0.00 DNM1P47 0 genome.wustl.edu 37 15 102295647 102295647 + RNA SNP C C A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 15 102295647 102295647 C A SNP DNM1P47 ENST00000561463 human ensembl 74_37 1 known rna NULL NULL 0.961 0 0 0 no_errors rs200665354 C->A,G 0 17 0 0 15 4 21.05 0 0 0.00 5 0 0.00 NPIPB11 0 genome.wustl.edu 37 16 29394193 29394193 + Missense_Mutation SNP G G A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 16 29394193 29394193 G A SNP NPIPB11 ENST00000524087 human ensembl 74_37 -1 putative missense c.2060 p.P687L 0.002 NULL NULL 0 no_errors 0 0 0 15 1 6.25 14 4 22.22 0 0 0.00 0 0 0.00 KRTAP4-8 0 genome.wustl.edu 37 17 39254112 39254113 + Frame_Shift_Ins INS - - A TCGA-ZB-A96E-01A-11D-A428-09 TCGA-ZB-A96E-10A-01D-A42B-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 92295e76-5176-4206-bfe5-81936dd2dd55 6e98bcfd-c662-4103-9c48-c8935b77d8ff 17 39254112 39254113 0 A INS KRTAP4-8 ENST00000333822 human ensembl 74_37 -1 known frame_shift_ins c.225_224 p.K76fs 0.906:1.000 NULL pfam_Keratin-assoc 0 no_errors 0 0 0 67 1 1.47 61 6 8.96 3 0 0.00 1 0 0.00