Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
LUZP1	0	genome.wustl.edu	37	1	23420652	23420652	+	Missense_Mutation	SNP	T	T	C			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	1	23420652	23420652	T	C	SNP	LUZP1	ENST00000302291	human	ensembl	74_37	-1	known	missense	c.103	p.K35E	0.955	NULL	NULL	0	no_errors	rs533244242	T->C	0.9998,0.0001997	73	0	0	29	22	43.14	238	0	0.00	147	69	31.80
HAO2	0	genome.wustl.edu	37	1	119934843	119934843	+	Silent	SNP	T	T	C			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	1	119934843	119934843	T	C	SNP	HAO2	ENST00000361035	human	ensembl	74_37	1	known	silent	c.921	p.A307	0.119	pfam_FMN-dep_DH,pfam_IMP_DH_GMPRt,pfam_Glu_synth_centr_C,pirsf_Alpha-hydoxy_acid_DH_FMN	pfam_FMN-dep_DH,pfam_IMP_DH_GMPRt,pfam_Glu_synth_centr_C,pirsf_Alpha-hydoxy_acid_DH_FMN	0	no_errors	0	0	0	50	0	0	20	11	35.48	197	0	0.00	148	67	31.16
SH3YL1	0	genome.wustl.edu	37	2	231121	231121	+	Missense_Mutation	SNP	C	C	A			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	2	231121	231121	C	A	SNP	SH3YL1	ENST00000356150	human	ensembl	74_37	-1	known	missense	c.604	p.D202Y	0.999	pfam_Ysc84_actin-binding	pfam_Ysc84_actin-binding,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	0	no_errors	0	0	0	126	0	0	69	36	34.29	227	0	0.00	195	63	24.14
BUB1	0	genome.wustl.edu	37	2	111419226	111419226	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	2	111419226	111419226	G	A	SNP	BUB1	ENST00000302759	human	ensembl	74_37	-1	known	missense	c.1150	p.P384S	0.001	NULL	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	53	0	0	26	8	23.53	167	0	0.00	92	52	36.11
NISCH	0	genome.wustl.edu	37	3	52524090	52524090	+	Splice_Site	SNP	G	G	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	3	52524090	52524090	G	T	SNP	NISCH	ENST00000345716	human	ensembl	74_37	1	known	splice_site	c.3457-1	e18-1	1	0	0	0	no_errors	0	0	0	45	0	0	11	10	47.62	193	1	0.52	70	52	42.62
ZNF827	0	genome.wustl.edu	37	4	146791434	146791434	+	Silent	SNP	T	T	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	4	146791434	146791434	T	G	SNP	ZNF827	ENST00000508784	human	ensembl	74_37	-1	known	silent	c.1944	p.S648	0.904	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	0	no_errors	0	0	0	55	0	0	39	4	9.3	211	0	0.00	199	68	25.47
NSD1	0	genome.wustl.edu	37	5	176637651	176637651	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	5	176637651	176637651	C	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	1	known	missense	c.2251	p.L751F	0.002	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	0	no_errors	0	0	0	45	0	0	33	10	23.26	191	0	0.00	150	58	27.88
C5orf60	0	genome.wustl.edu	37	5	179069370	179069370	+	Silent	SNP	G	G	A			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	5	179069370	179069370	G	A	SNP	C5orf60	ENST00000448248	human	ensembl	74_37	-1	known	silent	c.804	p.S268	0.006	NULL	NULL	0	no_errors	0	0	0	50	0	0	19	11	36.67	168	0	0.00	156	55	26.07
SP8	0	genome.wustl.edu	37	7	20825175	20825175	+	Silent	SNP	A	A	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	7	20825175	20825175	A	T	SNP	SP8	ENST00000418710	human	ensembl	74_37	-1	known	silent	c.261	p.A87	0.884	prints_Antifreeze_1	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Antifreeze_1	0	no_errors	0	0	0	23	0	0	5	4	44.44	78	0	0.00	31	29	48.33
NRG1	0	genome.wustl.edu	37	8	32621810	32621810	+	Missense_Mutation	SNP	T	T	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	8	32621810	32621810	T	G	SNP	NRG1	ENST00000338921	human	ensembl	74_37	1	known	missense	c.1837	p.F613V	1	pfam_Neuregulin_1_C	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	0	no_errors	0	0	0	78	0	0	54	21	28	118	0	0.00	92	45	32.85
ZNF487	0	genome.wustl.edu	37	10	43976897	43976897	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	10	43976897	43976897	C	G	SNP	ZNF487	ENST00000431662	human	ensembl	74_37	1	known	missense	c.346	p.L116V	0.348	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	124	0	0	83	38	31.4	306	0	0.00	212	86	28.86
ANTXRL	0	genome.wustl.edu	37	10	47669104	47669104	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	10	47669104	47669104	C	G	SNP	ANTXRL	ENST00000537271	human	ensembl	74_37	1	known	missense	c.692	p.A231G	0	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	0	no_errors	0	0	0	23	0	0	8	7	46.67	61	0	0.00	41	20	32.79
PTPRE	0	genome.wustl.edu	37	10	129869096	129869096	+	Nonsense_Mutation	SNP	A	A	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	10	129869096	129869096	A	T	SNP	PTPRE	ENST00000254667	human	ensembl	74_37	1	known	nonsense	c.1318	p.K440*	1	pirsf_Tyr_Pase_rcpt_a/e-type,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	0	no_errors	0	0	0	41	0	0	19	13	40.62	173	0	0.00	107	62	36.69
SLC22A9	0	genome.wustl.edu	37	11	63137596	63137596	+	Missense_Mutation	SNP	T	T	C			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	11	63137596	63137596	T	C	SNP	SLC22A9	ENST00000279178	human	ensembl	74_37	1	known	missense	c.68	p.F23S	0.071	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	0	no_errors	0	0	0	26	0	0	26	12	31.58	164	0	0.00	127	51	28.65
SIK3	0	genome.wustl.edu	37	11	116747729	116747729	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	11	116747729	116747729	C	G	SNP	SIK3	ENST00000375300	human	ensembl	74_37	-1	known	missense	c.895	p.V299L	1	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	35	0	0	17	15	45.45	144	0	0.00	87	39	30.95
NEUROD4	0	genome.wustl.edu	37	12	55420928	55420928	+	Silent	SNP	G	G	A			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	12	55420928	55420928	G	A	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	1	known	silent	c.705	p.S235	0.364	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	0	no_errors	rs528788272	G->A	0	45	0	0	21	7	25	276	1	0.36	155	75	32.61
WIF1	0	genome.wustl.edu	37	12	65462615	65462615	+	Missense_Mutation	SNP	A	A	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	12	65462615	65462615	A	G	SNP	WIF1	ENST00000286574	human	ensembl	74_37	-1	known	missense	c.467	p.V156A	0.996	pfam_WIF,smart_WIF,pfscan_WIF	pfam_WIF,pfam_EGF_extracell,smart_WIF,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_WIF,prints_Wnt-inh	0	no_errors	0	0	0	69	0	0	38	15	28.3	275	0	0.00	206	81	28.12
MGA	0	genome.wustl.edu	37	15	41991097	41991097	+	Nonsense_Mutation	SNP	G	G	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	15	41991097	41991097	G	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	1	known	nonsense	c.2050	p.E684*	0.956	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	0	no_errors	0	0	0	58	0	0	35	15	30	146	0	0.00	110	48	30.19
PCSK6	0	genome.wustl.edu	37	15	101971525	101971525	+	Silent	SNP	A	A	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	15	101971525	101971525	A	G	SNP	PCSK6	ENST00000348070	human	ensembl	74_37	-1	known	silent	c.654	p.Y218	0.937	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,pfam_PLAC,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,pfscan_PLAC,prints_Peptidase_S8_subtilisin-rel	0	no_errors	0	0	0	89	0	0	31	21	40.38	240	0	0.00	163	64	28.19
SRRM2	0	genome.wustl.edu	37	16	2815546	2815546	+	Missense_Mutation	SNP	A	A	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	16	2815546	2815546	A	G	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	1	known	missense	c.5017	p.R1673G	1	NULL	pfam_mRNA_splic_Cwf21	0	no_errors	0	0	0	22	0	0	14	4	21.05	194	1	0.51	134	47	25.97
ZNF431	0	genome.wustl.edu	37	19	21365735	21365735	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	19	21365735	21365735	G	A	SNP	ZNF431	ENST00000311048	human	ensembl	74_37	1	known	missense	c.629	p.G210D	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	rs537787342	G->A	0.9998,0.0001997	163	0	0	82	33	28.7	40	0	0.00	45	15	25.00
ZNF536	0	genome.wustl.edu	37	19	30935469	30935469	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	19	30935469	30935469	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	1	known	missense	c.1000	p.P334S	1	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	0	no_errors	rs370088671	C->T	0	26	0	0	14	3	17.65	106	0	0.00	66	26	28.26
PIK3R1	0	genome.wustl.edu	37	5	67590497	67590497	+	Frame_Shift_Del	DEL	A	A	-			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	5	67590497	67590497	A	0	DEL	PIK3R1	ENST00000396611	human	ensembl	74_37	1	known	frame_shift_del	c.1559	p.I521fs	1	superfamily_Guanylate-bd_C,prints_PI3kinase_P85	pfam_SH2,pfam_RhoGAP_dom,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Guanylate-bd_C,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	0	no_errors	0	0	0	114	0	0	88	21	19.27	320	0	0.00	231	52	18.37
SPTY2D1	0	genome.wustl.edu	37	11	18633082	18633082	+	Frame_Shift_Del	DEL	A	A	-			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	11	18633082	18633082	A	0	DEL	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	frame_shift_del	c.1906	p.Y636fs	1	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	0	no_errors	0	0	0	118	0	0	18	16	47.06	231	0	0.00	106	53	33.33
EIF5	0	genome.wustl.edu	37	14	103804757	103804759	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	CAC	CAC	CAC	-	CAC	CAC	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	14	103804757	103804759	CAC	0	DEL	EIF5	ENST00000216554	human	ensembl	74_37	1	known	in_frame_del	c.533_535	p.P182in_frame_del	1.000:0.985:0.984	NULL	pfam_Transl_init_fac_IF2/IF5,pfam_W2_domain,superfamily_ARM-type_fold,superfamily_Transl_init_fac_IF2/IF5_N,superfamily_Transl_init_fac_IF2/IF5_Zn-bd,smart_Transl_init_fac_IF2/IF5,smart_W2_domain	0	no_errors	0	0	0	55	0	0	34	5	12.82	70	1	1.41	56	4	6.67
ENSG00000203849	0	genome.wustl.edu	37	1	142713777	142713777	+	RNA	SNP	G	G	C			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	1	142713777	142713777	G	C	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.045	0	0	0	no_errors	0	0	0	303	0	0	140	70	33.18	0	0	0.00	0	0	0.00
ZNF676	0	genome.wustl.edu	37	19	22363559	22363559	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	19	22363559	22363559	C	G	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.960	p.W320C	0	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	125	0	0	100	19	15.83	7	0	0.00	3	0	0.00
TCEAL4	0	genome.wustl.edu	37	X	102831459	102831459	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZB-A96I-01A-11D-A428-09	TCGA-ZB-A96I-10A-01D-A42B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8ec3bfea-550b-441b-b825-83f72eb716e4	123b5ff7-2ca0-442d-8abf-fb95861c1cc3	X	102831459	102831459	G	0	DEL	TCEAL4	ENST00000372629	human	ensembl	74_37	1	known	frame_shift_del	c.62	p.G22fs	0.11	NULL	pfam_TF_A-like/BEX-like	0	no_errors	0	0	0	47	0	0	13	2	13.33	0	0	0.00	0	0	0.00