Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
XIST	0	genome.wustl.edu	37	X	73071116	73071116	+	RNA	SNP	T	T	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	X	73071116	73071116	T	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0	0	0	0	no_errors	0	0	0	13	0	0	9	16	64	104	0	0.00	42	113	72.90
NKAP	0	genome.wustl.edu	37	X	119077214	119077214	+	Missense_Mutation	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	X	119077214	119077214	C	G	SNP	NKAP	ENST00000371410	human	ensembl	74_37	-1	known	missense	c.355	p.D119H	1	NULL	pfam_DUF926	0	no_errors	0	0	0	44	0	0	39	13	25	60	0	0.00	45	17	27.42
PLEKHN1	0	genome.wustl.edu	37	1	907768	907768	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	907768	907768	G	A	SNP	PLEKHN1	ENST00000379409	human	ensembl	74_37	1	known	silent	c.1122	p.P374	0	NULL	smart_Pleckstrin_homology	0	no_errors	rs376185569	G->A	0.9996,0.0003994	22	0	0	10	4	28.57	52	0	0.00	22	5	17.86
C1orf127	0	genome.wustl.edu	37	1	11008316	11008316	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	11008316	11008316	G	A	SNP	C1orf127	ENST00000377004	human	ensembl	74_37	-1	known	missense	c.1876	p.R626C	0	NULL	superfamily_DNA-bd_dom_put	0	no_errors	rs370186380	G->A	0	67	0	0	39	11	22	85	0	0.00	42	20	32.26
PAX7	0	genome.wustl.edu	37	1	19071364	19071364	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	19071364	19071364	C	T	SNP	PAX7	ENST00000420770	human	ensembl	74_37	1	known	missense	c.1459	p.L487F	1	NULL	pfam_Paired_dom,pfam_Homeobox_dom,pfam_Pax7,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	0	no_errors	0	0	0	36	0	0	20	6	23.08	161	1	0.61	119	33	21.71
EPHA8	0	genome.wustl.edu	37	1	22919851	22919851	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	22919851	22919851	C	T	SNP	EPHA8	ENST00000166244	human	ensembl	74_37	1	known	missense	c.1348	p.R450W	0.987	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	70	0	0	52	4	7.14	54	0	0.00	39	2	4.76
SFPQ	0	genome.wustl.edu	37	1	35657000	35657000	+	Missense_Mutation	SNP	T	T	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	35657000	35657000	T	C	SNP	SFPQ	ENST00000357214	human	ensembl	74_37	-1	known	missense	c.959	p.Y320C	1	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_NOPS,smart_RRM_dom,pfscan_RRM_dom	0	no_errors	0	0	0	111	0	0	85	35	29.17	301	0	0.00	208	85	28.81
VAV3	0	genome.wustl.edu	37	1	108212015	108212015	+	Missense_Mutation	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	108212015	108212015	C	G	SNP	VAV3	ENST00000371846	human	ensembl	74_37	-1	known	missense	c.1662	p.K554N	0	NULL	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	0	no_errors	0	0	0	42	0	0	27	9	25	325	0	0.00	220	75	25.34
ECM1	0	genome.wustl.edu	37	1	150484110	150484110	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	150484110	150484110	G	C	SNP	ECM1	ENST00000369049	human	ensembl	74_37	1	known	missense	c.967	p.E323Q	0.021	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	0	no_errors	0	0	0	51	0	0	24	4	14.29	173	0	0.00	168	25	12.95
FAM78B	0	genome.wustl.edu	37	1	166135246	166135246	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	166135246	166135246	G	C	SNP	FAM78B	ENST00000338353	human	ensembl	74_37	-1	known	missense	c.240	p.F80L	1	NULL	NULL	0	no_errors	0	0	0	16	0	0	21	4	16	87	0	0.00	67	17	20.00
USH2A	0	genome.wustl.edu	37	1	215916612	215916612	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	215916612	215916612	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.11455	p.L3819	0.476	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	0	no_errors	0	0	0	80	0	0	56	12	17.65	273	1	0.36	209	43	17.00
HIST3H2A	0	genome.wustl.edu	37	1	228645484	228645484	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	228645484	228645484	C	T	SNP	HIST3H2A	ENST00000366695	human	ensembl	74_37	-1	known	missense	c.35	p.R12H	1	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	0	no_errors	0	0	0	25	0	0	19	6	24	89	0	0.00	75	26	25.74
SIPA1L2	0	genome.wustl.edu	37	1	232600795	232600795	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	1	232600795	232600795	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.2611	p.E871K	0.997	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	0	no_errors	0	0	0	22	0	0	32	6	15.79	157	0	0.00	125	44	25.88
SP3	0	genome.wustl.edu	37	2	174820297	174820297	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	2	174820297	174820297	G	A	SNP	SP3	ENST00000310015	human	ensembl	74_37	-1	known	missense	c.943	p.R315W	1	NULL	pfam_Znf_C2H2,superfamily_Galactose-bd-like,smart_Znf_C2H2-like,pfscan_Znf_C2H2	0	no_errors	0	0	0	48	0	0	19	4	17.39	156	0	0.00	113	47	29.38
TTN	0	genome.wustl.edu	37	2	179498642	179498642	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	2	179498642	179498642	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.34880	p.T11627S	0.994	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	0	no_errors	0	0	0	24	0	0	24	3	11.11	236	0	0.00	151	49	24.50
CHL1	0	genome.wustl.edu	37	3	440069	440069	+	Splice_Site	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	3	440069	440069	G	C	SNP	CHL1	ENST00000256509	human	ensembl	74_37	1	known	splice_site	c.3253+1	e23+1	1	0	0	0	no_errors	0	0	0	50	0	0	27	6	18.18	258	0	0.00	170	44	20.56
CLASP2	0	genome.wustl.edu	37	3	33576832	33576832	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	3	33576832	33576832	C	T	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.3701	p.R1234H	1	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	0	no_errors	0	0	0	48	0	0	25	16	39.02	141	1	0.70	128	33	20.50
DNAH1	0	genome.wustl.edu	37	3	52433570	52433570	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	3	52433570	52433570	G	C	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	1	known	missense	c.12451	p.E4151Q	0	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	0	no_errors	0	0	0	54	0	0	43	5	10.42	285	0	0.00	177	28	13.66
ABI3BP	0	genome.wustl.edu	37	3	100569540	100569540	+	Missense_Mutation	SNP	T	T	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	3	100569540	100569540	T	G	SNP	ABI3BP	ENST00000284322	human	ensembl	74_37	-1	known	missense	c.1264	p.T422P	1	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	0	no_errors	0	0	0	42	0	0	31	14	31.11	291	0	0.00	240	67	21.75
MED28	0	genome.wustl.edu	37	4	17616306	17616306	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	4	17616306	17616306	C	T	SNP	MED28	ENST00000237380	human	ensembl	74_37	1	known	missense	c.29	p.S10F	0.569	NULL	pfam_Mediator_Med28	0	no_errors	0	0	0	69	0	0	71	13	15.48	120	0	0.00	56	14	20.00
TXK	0	genome.wustl.edu	37	4	48114451	48114451	+	Missense_Mutation	SNP	T	T	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	4	48114451	48114451	T	A	SNP	TXK	ENST00000264316	human	ensembl	74_37	-1	known	missense	c.253	p.I85F	0.995	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	0	no_errors	0	0	0	50	0	0	33	18	35.29	234	0	0.00	126	48	27.59
PDCL2	0	genome.wustl.edu	37	4	56428640	56428640	+	Nonsense_Mutation	SNP	T	T	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	4	56428640	56428640	T	A	SNP	PDCL2	ENST00000295645	human	ensembl	74_37	-1	known	nonsense	c.502	p.K168*	1	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold	0	no_errors	0	0	0	58	0	0	28	18	39.13	213	1	0.47	189	66	25.88
LPHN3	0	genome.wustl.edu	37	4	62778447	62778447	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	4	62778447	62778447	G	C	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	1	known	missense	c.2084	p.R695T	1	pfam_DUF3497	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	0	no_errors	0	0	0	68	1	1.45	51	4	7.27	220	1	0.45	177	21	10.50
BANK1	0	genome.wustl.edu	37	4	102751113	102751113	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	4	102751113	102751113	G	A	SNP	BANK1	ENST00000322953	human	ensembl	74_37	1	known	silent	c.219	p.L73	0.021	NULL	superfamily_Ankyrin_rpt-contain_dom	0	no_errors	0	0	0	151	0	0	87	25	22.32	266	0	0.00	217	51	19.03
PCDHB7	0	genome.wustl.edu	37	5	140554630	140554630	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	5	140554630	140554630	C	T	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	1	known	silent	c.2214	p.S738	0.011	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	0	no_errors	0	0	0	111	1	0.89	76	15	16.3	84	0	0.00	106	10	8.55
MCUR1	0	genome.wustl.edu	37	6	13807194	13807194	+	Missense_Mutation	SNP	G	G	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	6	13807194	13807194	G	T	SNP	MCUR1	ENST00000379170	human	ensembl	74_37	-1	known	missense	c.498	p.F166L	0.983	pfam_DUF1640	pfam_DUF1640	0	no_errors	0	0	0	87	0	0	23	11	32.35	123	0	0.00	58	31	34.83
HIST1H2BB	0	genome.wustl.edu	37	6	26043842	26043842	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	6	26043842	26043842	G	A	SNP	HIST1H2BB	ENST00000357905	human	ensembl	74_37	-1	known	missense	c.44	p.S15F	0.989	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	0	no_errors	0	0	0	56	0	0	34	8	19.05	181	0	0.00	68	34	33.01
SGK1	0	genome.wustl.edu	37	6	134491476	134491476	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	6	134491476	134491476	G	A	SNP	SGK1	ENST00000367858	human	ensembl	74_37	-1	known	missense	c.1511	p.A504V	1	pfam_Pkinase_C,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_Phox,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	81	0	0	37	17	31.48	166	1	0.60	62	40	38.83
MLLT4	0	genome.wustl.edu	37	6	168319553	168319553	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	6	168319553	168319553	G	A	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	1	known	missense	c.2827	p.D943N	1	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	0	no_errors	0	0	0	33	0	0	13	3	18.75	274	0	0.00	95	17	15.18
USP42	0	genome.wustl.edu	37	7	6189291	6189291	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	7	6189291	6189291	C	T	SNP	USP42	ENST00000306177	human	ensembl	74_37	1	known	silent	c.1464	p.S488	0.005	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	0	no_errors	0	0	0	52	0	0	43	16	27.12	256	0	0.00	166	70	29.54
LSMEM1	0	genome.wustl.edu	37	7	112127106	112127106	+	Missense_Mutation	SNP	G	G	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	7	112127106	112127106	G	T	SNP	LSMEM1	ENST00000312849	human	ensembl	74_37	1	known	missense	c.256	p.V86F	0.973	NULL	NULL	0	no_errors	0	0	0	87	0	0	56	29	33.72	346	0	0.00	188	53	21.81
CHRM2	0	genome.wustl.edu	37	7	136699906	136699906	+	Silent	SNP	T	T	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	7	136699906	136699906	T	C	SNP	CHRM2	ENST00000320658	human	ensembl	74_37	1	known	silent	c.294	p.L98	0.818	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	0	no_errors	0	0	0	33	0	0	15	5	25	273	0	0.00	187	37	16.37
PTPRN2	0	genome.wustl.edu	37	7	157369457	157369457	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	7	157369457	157369457	G	A	SNP	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	silent	c.2700	p.S900	0.71	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	0	no_errors	0	0	0	19	0	0	11	3	21.43	92	0	0.00	59	13	18.06
C8orf47	0	genome.wustl.edu	37	8	99101420	99101420	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	8	99101420	99101420	C	T	SNP	C8orf47	ENST00000318528	human	ensembl	74_37	1	known	missense	c.175	p.R59C	0.015	NULL	NULL	0	no_errors	0	0	0	61	0	0	41	8	16.33	265	0	0.00	251	81	24.40
SLC45A4	0	genome.wustl.edu	37	8	142222381	142222381	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	8	142222381	142222381	C	T	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2216	p.R739K	0	NULL	superfamily_MFS_dom_general_subst_transpt	0	no_errors	0	0	0	30	0	0	22	11	33.33	53	0	0.00	40	27	40.30
PTPRD	0	genome.wustl.edu	37	9	8528717	8528717	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	9	8528717	8528717	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.415	p.R139C	1	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	0	no_errors	0	0	0	64	0	0	24	25	51.02	215	0	0.00	98	71	42.01
DAPK1	0	genome.wustl.edu	37	9	90219958	90219958	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	9	90219958	90219958	C	T	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	1	known	missense	c.152	p.S51F	1	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	0	no_errors	0	0	0	39	1	2.5	28	9	24.32	163	0	0.00	88	30	25.21
GAPVD1	0	genome.wustl.edu	37	9	128083733	128083733	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	9	128083733	128083733	G	A	SNP	GAPVD1	ENST00000394105	human	ensembl	74_37	1	known	missense	c.1624	p.D542N	1	NULL	pfam_RasGAP,pfam_VPS9,superfamily_Rho_GTPase_activation_prot,smart_VPS9_subgr,pfscan_VPS9,pfscan_RasGAP	0	no_errors	0	0	0	79	0	0	38	8	17.39	295	0	0.00	194	64	24.81
CUBN	0	genome.wustl.edu	37	10	16957098	16957098	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	10	16957098	16957098	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	silent	c.7284	p.V2428	1	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	0	no_errors	0	0	0	87	0	0	49	12	19.67	94	0	0.00	47	25	34.72
ZNF25	0	genome.wustl.edu	37	10	38241588	38241588	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	10	38241588	38241588	G	A	SNP	ZNF25	ENST00000302609	human	ensembl	74_37	-1	known	missense	c.838	p.H280Y	1	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	53	0	0	29	9	23.68	124	0	0.00	51	22	30.14
DCLRE1A	0	genome.wustl.edu	37	10	115595039	115595039	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	10	115595039	115595039	C	T	SNP	DCLRE1A	ENST00000361384	human	ensembl	74_37	-1	known	missense	c.2995	p.E999K	1	pfam_DRMBL	pfam_DRMBL	0	no_errors	0	0	0	103	0	0	78	32	29.09	319	0	0.00	192	60	23.72
PLCB3	0	genome.wustl.edu	37	11	64031214	64031214	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	11	64031214	64031214	C	T	SNP	PLCB3	ENST00000279230	human	ensembl	74_37	1	known	missense	c.2507	p.P836L	1	pirsf_PLC-beta,superfamily_C2_dom	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,pfam_PLC-beta_CS,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	0	no_errors	rs142407686	C->T	0	50	1	1.96	21	12	36.36	115	0	0.00	73	25	25.51
CCDC87	0	genome.wustl.edu	37	11	66358915	66358915	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	11	66358915	66358915	C	T	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	silent	c.1572	p.S524	0	NULL	pfam_MAP65_Ase1_PRC1	0	no_errors	0	0	0	52	0	0	46	13	21.67	240	0	0.00	167	51	23.39
RNF169	0	genome.wustl.edu	37	11	74547372	74547372	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	11	74547372	74547372	C	T	SNP	RNF169	ENST00000299563	human	ensembl	74_37	1	known	missense	c.1724	p.S575L	0.186	NULL	smart_Znf_RING,pfscan_Znf_RING	0	no_errors	0	0	0	79	0	0	39	14	26.42	289	0	0.00	172	64	27.12
MMP13	0	genome.wustl.edu	37	11	102818738	102818738	+	Missense_Mutation	SNP	C	C	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	11	102818738	102818738	C	A	SNP	MMP13	ENST00000340273	human	ensembl	74_37	-1	novel	missense	c.1093	p.G365C	1	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	0	no_errors	0	0	0	93	0	0	30	13	30.23	271	0	0.00	168	72	30.00
SLC2A14	0	genome.wustl.edu	37	12	7982501	7982501	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	12	7982501	7982501	C	T	SNP	SLC2A14	ENST00000396589	human	ensembl	74_37	-1	known	missense	c.443	p.R148H	0.996	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	0	no_errors	0	0	0	40	0	0	34	13	27.66	106	1	0.93	44	7	13.73
C12orf10	0	genome.wustl.edu	37	12	53700782	53700782	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	12	53700782	53700782	G	A	SNP	C12orf10	ENST00000549488	human	ensembl	74_37	1	putative	missense	c.491	p.R164Q	1	pfam_Met-dep_prot_hydro	pfam_Met-dep_prot_hydro	0	no_errors	0	0	0	24	0	0	16	14	46.67	92	1	1.08	85	49	36.30
USP30	0	genome.wustl.edu	37	12	109509448	109509448	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	12	109509448	109509448	C	T	SNP	USP30	ENST00000257548	human	ensembl	74_37	1	known	missense	c.512	p.S171L	0.997	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	0	no_errors	0	0	0	47	0	0	51	15	22.73	209	0	0.00	197	40	16.81
HECTD4	0	genome.wustl.edu	37	12	112704761	112704761	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	12	112704761	112704761	C	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.1801	p.G601S	1	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	0	no_errors	0	0	0	112	0	0	87	30	25.42	298	0	0.00	297	81	21.43
CLIP1	0	genome.wustl.edu	37	12	122763584	122763584	+	Silent	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	12	122763584	122763584	C	G	SNP	CLIP1	ENST00000540338	human	ensembl	74_37	-1	known	silent	c.3756	p.L1252	1	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain	0	no_errors	0	0	0	61	0	0	49	11	18.33	220	0	0.00	251	55	17.97
STARD13	0	genome.wustl.edu	37	13	33685017	33685017	+	Missense_Mutation	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	13	33685017	33685017	G	C	SNP	STARD13	ENST00000336934	human	ensembl	74_37	-1	known	missense	c.2635	p.R879G	0.362	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	0	no_errors	0	0	0	65	0	0	45	6	11.76	163	0	0.00	92	45	32.61
NAA16	0	genome.wustl.edu	37	13	41885703	41885703	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	13	41885703	41885703	C	T	SNP	NAA16	ENST00000379406	human	ensembl	74_37	1	known	silent	c.39	p.L13	1	pirsf_NatA_aux_su	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	0	no_errors	0	0	0	29	0	0	10	3	23.08	57	0	0.00	60	17	22.08
COL4A1	0	genome.wustl.edu	37	13	110830441	110830441	+	Missense_Mutation	SNP	G	G	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	13	110830441	110830441	G	T	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	missense	c.2596	p.Q866K	1	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	0	no_errors	0	0	0	43	0	0	38	14	26.92	228	1	0.44	164	45	21.53
MYH7	0	genome.wustl.edu	37	14	23902825	23902825	+	Silent	SNP	C	C	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	14	23902825	23902825	C	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	silent	c.117	p.V39	1	pfam_Myosin_N,superfamily_P-loop_NTPase	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	0	no_errors	0	0	0	36	0	0	13	4	23.53	161	0	0.00	121	29	19.33
POLE2	0	genome.wustl.edu	37	14	50120764	50120764	+	Silent	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	14	50120764	50120764	G	A	SNP	POLE2	ENST00000216367	human	ensembl	74_37	-1	known	silent	c.1155	p.I385	1	pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_e_bsu	pfam_DNA_pol_alpha/epsilon_bsu,pfam_DNA_pol_e_bsu_N,pirsf_DNA_pol_e_bsu	0	no_errors	0	0	0	173	0	0	123	31	20.13	322	0	0.00	198	58	22.57
KLC1	0	genome.wustl.edu	37	14	104135927	104135927	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	14	104135927	104135927	C	T	SNP	KLC1	ENST00000334553	human	ensembl	74_37	1	known	missense	c.877	p.H293Y	1	pfscan_TPR-contain_dom,prints_Kinesin_light	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Kinesin_light	0	no_errors	0	0	0	65	0	0	54	8	12.9	254	0	0.00	190	54	22.13
AHNAK2	0	genome.wustl.edu	37	14	105413036	105413036	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	14	105413036	105413036	C	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.8752	p.V2918I	0.017	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	0	no_errors	rs77077255	C->T	0	63	0	0	40	12	23.08	32	0	0.00	23	17	42.50
HERC2P3	0	genome.wustl.edu	37	15	20644361	20644361	+	RNA	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	15	20644361	20644361	C	T	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1	0	0	0	no_errors	0	0	0	35	0	0	48	9	15.79	8	0	0.00	7	2	22.22
SEC14L5	0	genome.wustl.edu	37	16	5057391	5057391	+	Silent	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	5057391	5057391	C	G	SNP	SEC14L5	ENST00000251170	human	ensembl	74_37	1	known	silent	c.1476	p.L492	1	superfamily_CRAL-TRIO_dom	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1,prints_CRAL-bd_toc_tran	0	no_errors	0	0	0	38	0	0	13	12	46.15	106	0	0.00	62	27	30.34
DNAH3	0	genome.wustl.edu	37	16	21136549	21136549	+	Missense_Mutation	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	21136549	21136549	C	G	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.1351	p.E451Q	0.994	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	0	no_errors	0	0	0	64	0	0	38	14	26.92	228	0	0.00	166	43	20.28
GTF3C1	0	genome.wustl.edu	37	16	27556751	27556751	+	Missense_Mutation	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	27556751	27556751	C	G	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	missense	c.315	p.E105D	1	NULL	pfam_TFIIIC_Bblock-bd	0	no_errors	0	0	0	41	0	0	28	11	28.21	296	0	0.00	186	69	27.06
MAZ	0	genome.wustl.edu	37	16	29821498	29821498	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	29821498	29821498	G	A	SNP	MAZ	ENST00000563402	human	ensembl	74_37	1	novel	missense	c.349	p.G117R	0.853	NULL	NULL	0	no_errors	rs11559001	G->A	0	18	0	0	5	4	44.44	35	0	0.00	29	13	30.95
CYLD	0	genome.wustl.edu	37	16	50820834	50820834	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	50820834	50820834	C	T	SNP	CYLD	ENST00000311559	human	ensembl	74_37	1	known	missense	c.2018	p.S673L	1	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_CAP-Gly_domain,pfam_Peptidase_C19/C67,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain,pfscan_Peptidase_C19/C67	0	no_errors	0	0	0	91	0	0	21	13	38.24	260	1	0.38	157	74	32.03
PLCG2	0	genome.wustl.edu	37	16	81965142	81965142	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	16	81965142	81965142	C	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	1	known	silent	c.2622	p.F874	0.603	superfamily_PLC-like_Pdiesterase_TIM-brl,smart_Pleckstrin_homology,pirsf_PLC-gamma	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	0	no_errors	0	0	0	64	0	0	17	6	26.09	241	0	0.00	61	40	39.60
MYH1	0	genome.wustl.edu	37	17	10411812	10411812	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	17	10411812	10411812	C	T	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.1765	p.V589M	1	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	0	no_errors	0	0	0	65	0	0	45	23	33.82	81	0	0.00	50	13	20.31
MYO15A	0	genome.wustl.edu	37	17	18036682	18036682	+	Silent	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	17	18036682	18036682	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	1	known	silent	c.4464	p.V1488	1	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	0	no_errors	0	0	0	25	0	0	17	8	32	127	0	0.00	94	19	16.81
CYB561	0	genome.wustl.edu	37	17	61511941	61511941	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	17	61511941	61511941	G	A	SNP	CYB561	ENST00000360793	human	ensembl	74_37	-1	known	missense	c.578	p.A193V	0	pfscan_Cyt_b561/ferric_Rdtase_TM	pfam_Cyt_b561_euk,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_Cyt_b561/ferric_Rdtase_TM	0	no_errors	0	0	0	54	0	0	27	12	30.77	117	0	0.00	59	24	28.92
RNF213	0	genome.wustl.edu	37	17	78318573	78318573	+	Silent	SNP	G	G	C			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	17	78318573	78318573	G	C	SNP	RNF213	ENST00000582970	human	ensembl	74_37	1	known	silent	c.6438	p.L2146	0	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	0	no_errors	0	0	0	50	0	0	33	13	28.26	193	0	0.00	107	31	22.46
FZR1	0	genome.wustl.edu	37	19	3532524	3532524	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	3532524	3532524	C	T	SNP	FZR1	ENST00000395095	human	ensembl	74_37	1	known	missense	c.1118	p.S373L	0.993	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	0	no_errors	0	0	0	32	0	0	12	9	42.86	40	0	0.00	26	8	23.53
PIAS4	0	genome.wustl.edu	37	19	4028760	4028760	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	4028760	4028760	C	T	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	1	known	missense	c.715	p.P239S	1	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	0	no_errors	0	0	0	45	0	0	21	14	40	118	0	0.00	92	33	26.40
FBN3	0	genome.wustl.edu	37	19	8191232	8191232	+	Splice_Site	SNP	C	C	G			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	8191232	8191232	C	G	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	splice_site	c.2555-1	e20-1	1	0	0	0	no_errors	0	0	0	96	0	0	51	7	12.07	81	0	0.00	44	14	24.14
C3P1	0	genome.wustl.edu	37	19	10169262	10169262	+	RNA	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	10169262	10169262	G	A	SNP	C3P1	ENST00000495140	human	ensembl	74_37	1	known	rna	NULL	NULL	0.618	0	0	0	no_errors	rs369148845	G->A	0.9998,0.0001997	40	1	2.44	39	4	9.3	171	1	0.58	111	34	23.45
WDR62	0	genome.wustl.edu	37	19	36558337	36558337	+	Missense_Mutation	SNP	G	G	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	36558337	36558337	G	A	SNP	WDR62	ENST00000401500	human	ensembl	74_37	1	known	missense	c.691	p.E231K	0.726	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	0	no_errors	0	0	0	21	0	0	17	6	26.09	230	0	0.00	136	41	23.16
NLRP12	0	genome.wustl.edu	37	19	54314512	54314512	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	19	54314512	54314512	C	T	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.401	p.R134H	0.983	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	0	no_errors	0	0	0	62	0	0	42	10	19.23	243	0	0.00	137	30	17.96
BMP2	0	genome.wustl.edu	37	20	6758985	6758985	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	20	6758985	6758985	C	T	SNP	BMP2	ENST00000378827	human	ensembl	74_37	1	known	missense	c.440	p.S147L	1	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	0	no_errors	0	0	0	183	0	0	109	31	22.14	296	0	0.00	259	73	21.99
TEX33	0	genome.wustl.edu	37	22	37397917	37397917	+	Missense_Mutation	SNP	A	A	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	22	37397917	37397917	A	T	SNP	TEX33	ENST00000381821	human	ensembl	74_37	-1	known	missense	c.450	p.F150L	0.991	NULL	NULL	0	no_errors	0	0	0	38	0	0	20	13	38.24	152	1	0.65	109	27	19.85
CACNA1I	0	genome.wustl.edu	37	22	40075830	40075830	+	Missense_Mutation	SNP	C	C	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	22	40075830	40075830	C	T	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	1	known	missense	c.5516	p.S1839F	1	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	0	no_errors	0	0	0	59	0	0	29	7	19.44	156	0	0.00	80	21	20.79
KIAA1841	0	genome.wustl.edu	37	2	61315638	61315639	+	RNA	INS	-	-	TA			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	-	-	-	TA	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	2	61315638	61315639	0	TA	INS	KIAA1841	ENST00000482513	human	ensembl	74_37	1	known	rna	NULL	NULL	0.001:0.001	0	0	0	no_errors	rs371063167	G->GTA	0	55	1	1.79	35	5	12.5	62	1	1.59	94	5	5.05
IRF1	0	genome.wustl.edu	37	5	131822507	131822508	+	Frame_Shift_Ins	INS	-	-	A			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	5	131822507	131822508	0	A	INS	IRF1	ENST00000245414	human	ensembl	74_37	-1	known	frame_shift_ins	c.394_393	p.K131fs	0.963:0.727	pirsf_Interferon_reg_fac-1/2	pfam_Interferon_reg_fact_DNA-bd_dom,smart_Interferon_reg_fact_DNA-bd_dom,pirsf_Interferon_reg_fac-1/2,prints_Interferon_reg_fact_DNA-bd_dom	0	no_errors	0	0	0	20	0	0	9	5	35.71	211	0	0.00	120	58	32.58
TNFAIP3	0	genome.wustl.edu	37	6	138192383	138192386	+	Frame_Shift_Del	DEL	CCTC	CCTC	-			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	CCTC	CCTC	CCTC	-	CCTC	CCTC	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	6	138192383	138192386	CCTC	0	DEL	TNFAIP3	ENST00000237289	human	ensembl	74_37	1	known	frame_shift_del	c.19_22	p.P7fs	1.000:1.000:0.996:1.000	NULL	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	0	no_errors	0	0	0	24	0	0	16	7	30.43	161	0	0.00	96	27	21.95
GPR180	0	genome.wustl.edu	37	13	95271505	95271505	+	Frame_Shift_Del	DEL	C	C	-			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	13	95271505	95271505	C	0	DEL	GPR180	ENST00000376958	human	ensembl	74_37	1	known	frame_shift_del	c.607	p.H203fs	1	pfam_Intimal_thickness-rel_rcpt,pfam_TM_rcpt_euk	pfam_Intimal_thickness-rel_rcpt,pfam_TM_rcpt_euk	0	no_errors	0	0	0	62	0	0	23	13	36.11	274	0	0.00	150	49	24.62
SYNE2	0	genome.wustl.edu	37	14	64679552	64679552	+	Frame_Shift_Del	DEL	A	A	-			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	14	64679552	64679552	A	0	DEL	SYNE2	ENST00000358025	human	ensembl	74_37	1	known	frame_shift_del	c.18885	p.N6296fs	0.999	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	0	no_errors	0	0	0	62	0	0	26	11	29.73	231	0	0.00	163	51	23.83
ENSG00000221810	0	genome.wustl.edu	37	5	92053146	92053147	+	RNA	DEL	TG	TG	-			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	5	92053146	92053147	TG	0	DEL	ENSG00000221810	ENST00000408883	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.002:0.000	0	0	0	no_errors	0	0	0	39	0	0	28	3	9.68	0	0	0.00	0	0	0.00
UBE2B	0	genome.wustl.edu	37	5	133707247	133707248	+	RNA	INS	-	-	T			TCGA-ZC-AAA7-01A-11D-A428-09	TCGA-ZC-AAA7-10A-01D-A42B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffff19c4-ab2a-46f5-b3c0-70ba3d596b83	7d8aa72e-fa4e-4918-8af6-d7a12d3e601d	5	133707247	133707248	0	T	INS	UBE2B	ENST00000511807	human	ensembl	74_37	1	known	rna	NULL	NULL	1.000:1.000	0	0	0	no_errors	0	0	0	34	1	2.86	22	2	8.33	0	0	0.00	3	0	0.00