Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
ATRX	0	genome.wustl.edu	37	X	76761288	76761288	+	RNA	SNP	A	A	C			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	X	76761288	76761288	A	C	SNP	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	1	0	0	0	no_errors	0	0	0	43	0	0	10	28	73.68	104	0	0.00	22	62	73.81
NRK	0	genome.wustl.edu	37	X	105156725	105156725	+	Missense_Mutation	SNP	T	T	C			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	X	105156725	105156725	T	C	SNP	NRK	ENST00000428173	human	ensembl	74_37	1	known	missense	c.2330	p.I777T	0	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	0	no_errors	0	0	0	114	0	0	77	32	29.36	148	0	0.00	94	31	24.80
SERPINE2	0	genome.wustl.edu	37	2	224866430	224866430	+	Missense_Mutation	SNP	C	C	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	2	224866430	224866430	C	A	SNP	SERPINE2	ENST00000258405	human	ensembl	74_37	-1	known	missense	c.188	p.G63V	1	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	0	no_errors	0	0	0	16	0	0	8	5	38.46	109	0	0.00	69	32	31.68
WDR17	0	genome.wustl.edu	37	4	177071055	177071055	+	Silent	SNP	A	A	C			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	4	177071055	177071055	A	C	SNP	WDR17	ENST00000280190	human	ensembl	74_37	1	known	silent	c.2067	p.V689	0.984	pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	0	no_errors	0	0	0	109	0	0	63	28	30.77	226	0	0.00	131	56	29.95
TENM3	0	genome.wustl.edu	37	4	183696284	183696284	+	Missense_Mutation	SNP	A	A	G			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	4	183696284	183696284	A	G	SNP	TENM3	ENST00000406950	human	ensembl	74_37	1	known	missense	c.5282	p.N1761S	0.672	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	0	no_errors	0	0	0	36	0	0	33	7	17.5	266	0	0.00	136	83	37.90
DEFB112	0	genome.wustl.edu	37	6	50011451	50011451	+	Missense_Mutation	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	6	50011451	50011451	C	T	SNP	DEFB112	ENST00000322246	human	ensembl	74_37	-1	known	missense	c.179	p.R60Q	0.002	NULL	NULL	0	no_errors	0	0	0	79	0	0	28	25	47.17	233	0	0.00	136	63	31.66
IGF2R	0	genome.wustl.edu	37	6	160485520	160485520	+	Missense_Mutation	SNP	G	G	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	6	160485520	160485520	G	A	SNP	IGF2R	ENST00000356956	human	ensembl	74_37	1	known	missense	c.3974	p.R1325H	0.888	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	0	no_errors	0	0	0	37	0	0	18	8	30.77	148	0	0.00	108	34	23.94
GTF2I	0	genome.wustl.edu	37	7	74146970	74146970	+	Missense_Mutation	SNP	T	T	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	7	74146970	74146970	T	A	SNP	GTF2I	ENST00000324896	human	ensembl	74_37	1	known	missense	c.1271	p.L424H	1	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	0	no_errors	0	0	0	339	0	0	277	135	32.69	122	0	0.00	79	50	38.46
ADAM18	0	genome.wustl.edu	37	8	39587436	39587436	+	Nonsense_Mutation	SNP	G	G	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	8	39587436	39587436	G	T	SNP	ADAM18	ENST00000265707	human	ensembl	74_37	1	known	nonsense	c.2197	p.E733*	0.457	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	0	no_errors	0	0	0	84	0	0	55	31	36.05	265	0	0.00	166	96	36.64
ZBTB10	0	genome.wustl.edu	37	8	81411811	81411811	+	Missense_Mutation	SNP	G	G	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	8	81411811	81411811	G	A	SNP	ZBTB10	ENST00000430430	human	ensembl	74_37	1	known	missense	c.1055	p.R352Q	1	superfamily_BTB/POZ_fold	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	0	no_errors	0	0	0	111	0	0	78	35	30.97	196	0	0.00	156	75	32.33
YME1L1	0	genome.wustl.edu	37	10	27434500	27434500	+	Missense_Mutation	SNP	T	T	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	10	27434500	27434500	T	A	SNP	YME1L1	ENST00000326799	human	ensembl	74_37	-1	known	missense	c.359	p.D120V	1	NULL	pfam_Peptidase_M41,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	0	no_errors	0	0	0	68	0	0	56	15	20.83	280	0	0.00	166	88	34.65
PAOX	0	genome.wustl.edu	37	10	135193684	135193684	+	Silent	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	10	135193684	135193684	C	T	SNP	PAOX	ENST00000278060	human	ensembl	74_37	1	known	silent	c.363	p.S121	0.001	pfam_Amino_oxidase	pfam_Amino_oxidase	0	no_errors	rs527822098	C->T	0	77	0	0	24	16	40	48	0	0.00	35	36	50.70
HRAS	0	genome.wustl.edu	37	11	533552	533552	+	Missense_Mutation	SNP	C	C	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	11	533552	533552	C	A	SNP	HRAS	ENST00000311189	human	ensembl	74_37	-1	known	missense	c.351	p.K117N	0.999	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	0	no_errors	0	0	0	49	0	0	21	10	32.26	175	0	0.00	92	57	38.26
MADD	0	genome.wustl.edu	37	11	47311710	47311710	+	Missense_Mutation	SNP	G	G	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	11	47311710	47311710	G	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	1	known	missense	c.3014	p.R1005L	1	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	0	no_errors	0	0	0	50	0	0	29	3	9.38	200	0	0.00	185	9	4.62
PYGM	0	genome.wustl.edu	37	11	64522263	64522263	+	Missense_Mutation	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	11	64522263	64522263	C	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.901	p.V301M	1	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	0	no_errors	0	0	0	70	0	0	23	15	39.47	91	0	0.00	50	26	34.21
FAM186A	0	genome.wustl.edu	37	12	50746771	50746771	+	Missense_Mutation	SNP	T	T	G			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	12	50746771	50746771	T	G	SNP	FAM186A	ENST00000327337	human	ensembl	74_37	-1	known	missense	c.3844	p.K1282Q	0.759	NULL	NULL	0	no_errors	0	0	0	118	1	0.84	115	10	8	50	1	1.96	61	4	6.15
CTSG	0	genome.wustl.edu	37	14	25042983	25042983	+	Missense_Mutation	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	14	25042983	25042983	C	T	SNP	CTSG	ENST00000216336	human	ensembl	74_37	-1	known	missense	c.628	p.V210M	0.534	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	0	no_errors	0	0	0	45	0	0	24	11	31.43	160	0	0.00	135	49	26.63
CHRNA7	0	genome.wustl.edu	37	15	32460238	32460238	+	Missense_Mutation	SNP	G	G	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	15	32460238	32460238	G	A	SNP	CHRNA7	ENST00000454250	human	ensembl	74_37	1	known	missense	c.1175	p.R392H	1	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	0	no_errors	rs199698778	G->A	0	106	0	0	92	13	12.26	71	0	0.00	42	13	23.64
MIB1	0	genome.wustl.edu	37	18	19418334	19418334	+	Missense_Mutation	SNP	G	G	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	18	19418334	19418334	G	A	SNP	MIB1	ENST00000261537	human	ensembl	74_37	1	known	missense	c.1838	p.R613H	1	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Mib_Herc2,pfam_Znf_ZZ,superfamily_Ankyrin_rpt-contain_dom,smart_Znf_ZZ,smart_Ankyrin_rpt,smart_Znf_RING,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_RING,pfscan_Znf_ZZ,prints_Ankyrin_rpt	0	no_errors	0	0	0	90	0	0	84	32	27.59	221	2	0.89	147	68	31.63
ABCA7	0	genome.wustl.edu	37	19	1043091	1043091	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	19	1043091	1043091	C	T	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	1	known	nonsense	c.631	p.R211*	0.016	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	0	no_errors	0	0	0	25	0	0	16	4	20	28	0	0.00	7	11	61.11
PRR12	0	genome.wustl.edu	37	19	50098913	50098913	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	19	50098913	50098913	C	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	1	novel	nonsense	c.1321	p.Q441*	1	NULL	NULL	0	no_errors	0	0	0	12	0	0	5	3	37.5	88	0	0.00	59	27	31.40
FOS	0	genome.wustl.edu	37	14	75746886	75746886	+	Frame_Shift_Del	DEL	C	C	-			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	14	75746886	75746886	C	0	DEL	FOS	ENST00000554617	human	ensembl	74_37	1	putative	frame_shift_del	c.448	p.R151fs	0	NULL	NULL	0	no_errors	0	0	0	15	0	0	8	9	52.94	119	0	0.00	76	33	30.28
MT-RNR2	0	genome.wustl.edu	37	MT	1945	1945	+	RNA	SNP	A	A	C			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	MT	1945	1945	A	C	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	1	known	rna	NULL	NULL	NULL	0	0	0	no_errors	0	0	0	24	0	0	6	4	40	3	0	0.00	4	0	0.00
LOC101928654	0	genome.wustl.edu	37	7	57696839	57696839	+	RNA	SNP	C	C	T			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	7	57696839	57696839	C	T	SNP	LOC101928654	ENST00000436522	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	0	0	0	no_errors	rs112957140	C->T	0	15	0	0	1	2	66.67	10	0	0.00	2	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102300323	102300323	+	RNA	SNP	C	C	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	15	102300323	102300323	C	A	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	1	known	rna	NULL	NULL	0.996	0	0	0	no_errors	0	0	0	46	0	0	45	9	16.67	5	0	0.00	2	0	0.00
ZNF714	0	genome.wustl.edu	37	19	21301036	21301036	+	Silent	SNP	C	C	A			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	19	21301036	21301036	C	A	SNP	ZNF714	ENST00000596143	human	ensembl	74_37	1	known	silent	c.1566	p.I522	0.578	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	12	0	0	20	2	9.09	0	0	0.00	3	0	0.00
DHX33	0	genome.wustl.edu	37	17	5372037	5372039	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-ZL-A9V6-01A-11D-A428-09	TCGA-ZL-A9V6-10A-01D-A42B-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	07912020-3e0d-4830-85eb-adb5d6ee4da6	adc4cfc4-4f4e-4f34-a036-d4d2de2ad4a0	17	5372037	5372039	CCT	0	DEL	DHX33	ENST00000225296	human	ensembl	74_37	-1	known	in_frame_del	c.143_141	p.G48in_frame_del	1.000:1.000:1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	0	no_errors	0	0	0	31	0	0	12	2	14.29	5	0	0.00	7	0	0.00