Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain TAS1R2 80834 genome.wustl.edu 37 1 19181044 19181044 + Missense_Mutation SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_152232.2 -1 validated p.D307V 0.998 45 0% 97 25.8% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_ANF_receptor,superfamily_SSF53822 MIR1290 100302276 genome.wustl.edu 37 1 19223634 19223634 + RNA SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000408735 -1 known NULL 0.000 20 0% 40 17.5% 0 - - - - - UBR4 23352 genome.wustl.edu 37 1 19407898 19407898 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020765.2 -1 validated p.R5060W 1.000 90 0% 236 21.2% 89 48.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL EPHB2 2048 genome.wustl.edu 37 1 23111349 23111349 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004442.6 +1 reviewed p.C197 1.000 12 0% 43 23.3% 8 50% - - - HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1 SDC3 9672 genome.wustl.edu 37 1 31349871 31349871 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014654.3 -1 reviewed p.R133H 0.810 6 0.000 32 0.281 20 45% unknown(0) tolerated(0.35) - HMMPfam_Syndecan PUM1 9698 genome.wustl.edu 37 1 31418287 31418287 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001020658.1 -1 reviewed p.V967A 1.000 119 0% 227 22.5% 61 37.7% probably_damaging(0.986) deleterious(0.02) deleterious(0.818) HMMPfam_PUF,HMMSmart_SM00025,superfamily_ARM repeat IQCC 55721 genome.wustl.edu 37 1 32673465 32673465 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018134.2 +1 validated p.L395I 0.048 63 0% 186 28% 9 55.5% possibly_damaging(0.915) tolerated(0.3) neutral(0.395) NULL ZC3H12A 80149 genome.wustl.edu 37 1 37947390 37947390 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_025079.2 +1 validated p.R258C 1.000 20 0% 64 34.4% 33 57.5% possibly_damaging(0.691) deleterious(0) deleterious(0.692) NULL COL9A2 1298 genome.wustl.edu 37 1 40775613 40775613 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001852.3 -1 reviewed p.D281 0.984 93 0% 236 22% 17 41.1% - - - HMMPfam_Collagen EPS15 2060 genome.wustl.edu 37 1 51946946 51946946 + Missense_Mutation SNP T T G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001981.2 -1 reviewed p.Q25P 1.000 95 0% 202 26.2% 5 20% probably_damaging(0.959) deleterious(0.02) deleterious(0.786) HMMSmart_SM00027,superfamily_EF-hand ZCCHC11 23318 genome.wustl.edu 37 1 52954689 52954689 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001009881.1 -1 validated p.V469 1.000 206 0% 382 28.8% 7 71.4% - - - superfamily_Nucleotidyltransferase SLC1A7 6512 genome.wustl.edu 37 1 53558351 53558351 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006671.4 -1 validated p.C302 0.306 37 0% 72 29.2% 0 - - - - HMMPfam_SDF MRPL37 51253 genome.wustl.edu 37 1 54681841 54681841 + Missense_Mutation SNP G G A rs184402036 by1000genomes TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_016491.3 +1 reviewed p.V340M 0.027 68 0% 175 27.4% 146 39.7% possibly_damaging(0.682) deleterious(0.01) deleterious(0.649) NULL NEXN 91624 genome.wustl.edu 37 1 78392474 78392474 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_144573.3 +1 reviewed p.L254P 0.996 331 0.3% 551 29% 2 0% probably_damaging(0.999) tolerated(0.1) deleterious(0.777) NULL MCOLN3 55283 genome.wustl.edu 37 1 85486955 85486955 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018298.9 -1 validated p.R442H 1.000 77 0% 178 24.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans HIAT1 64645 genome.wustl.edu 37 1 100544103 100544103 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_033055.2 +1 validated p.Q367H 0.997 108 0% 204 25% 54 57.4% probably_damaging(0.999) deleterious(0.05) deleterious(0.836) HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter KCNA2 3737 genome.wustl.edu 37 1 111147166 111147166 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004974.2 -1 reviewed p.R80L 1.000 65 0% 165 26.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold MOV10 4343 genome.wustl.edu 37 1 113234346 113234346 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001130079.1 +1 validated p.R299H 0.502 39 0% 111 29.7% 72 44.4% benign(0.004) tolerated(0.59) neutral(0.004) NULL DCLRE1B 64858 genome.wustl.edu 37 1 114453967 114453967 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_022836.3 +1 validated p.T251 0.999 79 0% 260 25.8% 32 37.5% - - - HMMPfam_DRMBL HAO2 51179 genome.wustl.edu 37 1 119925543 119925543 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001005783.1 +1 reviewed p.R46H 1.000 71 0% 136 18.4% 0 - probably_damaging(0.955) tolerated(0.11) deleterious(0.670) HMMPfam_FMN_dh,superfamily_FMN-linked oxidoreductases LELP1 149018 genome.wustl.edu 37 1 153177462 153177462 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001010857.1 +1 provisional p.P93 0.001 72 0% 237 47.3% 0 - - - - NULL CLK2 1196 genome.wustl.edu 37 1 155235678 155235678 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003993.2 -1 reviewed p.D301 1.000 60 0% 289 14.5% 59 23.7% - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase SPTA1 6708 genome.wustl.edu 37 1 158607931 158607931 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003126.2 -1 reviewed p.R1694H 1.000 222 0% 515 17.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat OR10J3 441911 genome.wustl.edu 37 1 159284002 159284002 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001004467.1 -1 provisional p.L150M 0.274 215 0% 661 20.3% 0 - possibly_damaging(0.903) deleterious(0) deleterious(0.802) HMMPfam_7tm_1,superfamily_SSF81321 PVRL4 81607 genome.wustl.edu 37 1 161047308 161047308 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_030916.2 -1 validated p.T222I 1.000 52 0% 225 17.8% 41 21.9% probably_damaging(0.999) tolerated(0.06) deleterious(0.813) HMMPfam_C2-set_2,superfamily_SSF48726 GPA33 10223 genome.wustl.edu 37 1 167024273 167024273 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005814.1 -1 reviewed p.I256T 0.011 92 0% 375 13.3% 0 - benign(0.072) deleterious(0.02) neutral(0.388) NULL KIFAP3 22920 genome.wustl.edu 37 1 169951166 169951166 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014970.2 -1 reviewed p.A582V 1.000 167 0% 318 14.8% 40 17.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00185,HMMPfam_KAP,superfamily_ARM repeat FMO4 2329 genome.wustl.edu 37 1 171310622 171310622 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002022.1 +1 reviewed p.I441V 0.558 186 0% 475 14.9% 2 50% benign(0.003) tolerated(0.32) neutral(0.024) HMMPfam_FMO-like FAM20B 9917 genome.wustl.edu 37 1 179019441 179019441 + Silent SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014864.3 +1 validated p.G135 1.000 112 0% 328 16.8% 11 27.2% - - - NULL CEP350 9857 genome.wustl.edu 37 1 179975700 179975700 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014810.4 +1 reviewed p.T415I 1.000 21 0% 75 14.7% 4 0% possibly_damaging(0.907) deleterious(0.03) deleterious(0.725) NULL XPR1 9213 genome.wustl.edu 37 1 180832953 180832953 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004736.3 +1 validated p.F537 1.000 335 0% 755 17.5% 34 35.2% - - - HMMPfam_EXS KIAA1614 57710 genome.wustl.edu 37 1 180885980 180885980 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020950.1 +1 validated p.G247 0.000 43 0% 186 22% 1 0% - - - NULL NR5A2 2494 genome.wustl.edu 37 1 200017492 200017492 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_205860.1 +1 validated p.A219V 1.000 179 0% 510 17.5% 1 0% benign(0.003) tolerated(0.4) neutral(0.016) superfamily_Nuclear receptor ligand-binding domain PIGR 5284 genome.wustl.edu 37 1 207112777 207112777 + Silent SNP G G T rs190452650 by1000genomes TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002644.3 -1 reviewed p.P25 0.115 45 0% 167 16.2% 363 23.9% - - - HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 SMYD2 56950 genome.wustl.edu 37 1 214504325 214504325 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020197.2 +1 validated p.S283 0.000 111 0% 337 13.1% 130 11.5% - - - NULL ESRRG 2104 genome.wustl.edu 37 1 216850675 216850675 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001438.2 -1 validated p.M72T 1.000 182 0% 407 17.7% 0 - benign(0) deleterious(0) neutral(0.445) NULL IARS2 55699 genome.wustl.edu 37 1 220318939 220318942 + Frame_Shift_Del DEL GAGA GAGA - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 GAGA GAGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018060.3 +1 validated p.E948fs 0.000:0.000:0.000:0.000 - - - - - - - - - superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases NVL 4931 genome.wustl.edu 37 1 224495854 224495854 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002533.2 -1 validated p.R152W 0.000 211 0% 664 17.9% 14 0% benign(0) tolerated(0.09) neutral(0.296) NULL PARP1 142 genome.wustl.edu 37 1 226549169 226549169 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001618.3 -1 reviewed p.L1013 1.000 31 0% 106 17.9% 420 21.1% - - - NULL SNAP47 116841 genome.wustl.edu 37 1 227935806 227935806 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000426344 +1 known p.G160R 0.000 49 0% 179 19% 54 18.5% - - - NULL TTC13 79573 genome.wustl.edu 37 1 231060587 231060587 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024525.4 -1 validated p.R574M 1.000 222 0% 692 16.5% 33 30.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL RYR2 6262 genome.wustl.edu 37 1 237756906 237756906 + Missense_Mutation SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001035.2 +1 reviewed p.L1469Q 0.998 198 0% 436 17% 0 - possibly_damaging(0.948) - - HMMPfam_SPRY,HMMSmart_SM00449 RYR2 6262 genome.wustl.edu 37 1 237949335 237949335 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001035.2 +1 reviewed p.E4443K 0.998 91 0% 228 12.3% 0 - possibly_damaging(0.649) - - HMMPfam_RR_TM4-6 ZNF238 10472 genome.wustl.edu 37 1 244217614 244217614 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_205768.2 +1 validated p.P180S 1.000 119 0% 320 16.6% 9 22.2% probably_damaging(0.988) tolerated(0.83) neutral(0.438) NULL FSHR 2492 genome.wustl.edu 37 2 49190277 49190277 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000145.3 -1 reviewed p.I561 0.280 106 0% 200 30.5% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like BCL11A 53335 genome.wustl.edu 37 2 60687938 60687938 + Silent SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_022893.3 -1 reviewed p.P703 0.997 52 0% 68 10.3% 1 0% - - - NULL MOGS 7841 genome.wustl.edu 37 2 74690030 74690030 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006302.2 -1 reviewed p.R296C 0.998 47 0% 123 17.1% 66 40.9% probably_damaging(1) deleterious(0.04) deleterious(0.849) HMMPfam_Glyco_hydro_63 PCGF1 84759 genome.wustl.edu 37 2 74733892 74733892 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032673.2 -1 validated p.I107V 1.000 29 0% 90 21.1% 58 43.1% benign(0.115) tolerated(0.05) neutral(0.354) superfamily_RING/U-box CNNM4 26504 genome.wustl.edu 37 2 97474357 97474357 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020184.3 +1 reviewed p.R670S 1.000 27 0% 56 17.9% 9 33.3% probably_damaging(1) tolerated(0.1) deleterious(0.786) HMMSmart_cNMP RALB 5899 genome.wustl.edu 37 2 121047236 121047236 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002881.2 +1 reviewed p.R135Q 1.000 174 0% 253 24.1% 18 33.3% benign(0.011) tolerated(0.31) neutral(0.028) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases RAPGEF4 11069 genome.wustl.edu 37 2 173830320 173830320 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_007023.3 +1 validated p.D243 1.000 135 0% 221 20.4% 2 0% - - - "HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain" GULP1 51454 genome.wustl.edu 37 2 189387550 189387550 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_016315.2 +1 validated p.L53P 0.968 130 0% 181 22.1% 1 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like DNPEP 23549 genome.wustl.edu 37 2 220239057 220239059 + In_Frame_Del DEL AAG AAG - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 AAG AAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_012100.2 -1 reviewed p.F472in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Peptidase_M18,superfamily_SSF53187 DNER 92737 genome.wustl.edu 37 2 230252980 230252980 + Splice_Site SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_139072.3 -1 validated e11+1 1.000 236 0% 400 22% 0 - - - - - CHRNG 1146 genome.wustl.edu 37 2 233407755 233407755 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005199.4 +1 reviewed p.S256 1.000 77 0% 246 23.6% 0 - - - - HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM GIGYF2 26058 genome.wustl.edu 37 2 233708863 233708863 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001103147.1 +1 reviewed p.T1020 0.002 51 0% 99 12.1% 21 4.7% unknown(0) - - NULL AGAP1 116987 genome.wustl.edu 37 2 236817526 236817526 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001037131.1 +1 validated p.S434G 1.000 100 1% 212 26.9% 11 45.4% possibly_damaging(0.46) tolerated(0.36) neutral(0.171) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like COL6A3 1293 genome.wustl.edu 37 2 238249575 238249575 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004369.3 -1 reviewed p.A2662T 0.985 122 0.8% 243 25.5% 110 0% possibly_damaging(0.942) - - HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like IL5RA 3568 genome.wustl.edu 37 3 3139847 3139847 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000564.3 -1 reviewed p.E165D 0.699 129 0% 235 23.4% 1 0% benign(0.005) tolerated(0.53) neutral(0.007) HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2,superfamily_Fibronectin type III LRRN1 57633 genome.wustl.edu 37 3 3886563 3886563 + Nonsense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020873.5 +1 validated p.Q80* 1.000 264 0% 400 25% 0 - - - - superfamily_SSF52058 TOP2B 7155 genome.wustl.edu 37 3 25639915 25639915 + Silent SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001068.2 -1 reviewed p.S1583 1.000 86 0% 159 23.3% 146 45.2% - - - HMMPfam_DTHCT STAC 6769 genome.wustl.edu 37 3 36485054 36485054 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003149.1 +1 provisional p.G104C 0.001 180 0% 324 25.6% 1 100% benign(0.34) tolerated(0.07) neutral(0.426) NULL SCN5A 6331 genome.wustl.edu 37 3 38598029 38598029 + Missense_Mutation SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001099404.1 -1 reviewed p.Y1447F 1.000 21 0% 61 24.6% 0 - possibly_damaging(0.557) deleterious(0) deleterious(0.635) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels BSN 8927 genome.wustl.edu 37 3 49699436 49699436 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003458.3 +1 reviewed p.A3386 1.000 19 0% 124 20.2% 1 100% - - - NULL FAM212A 389119 genome.wustl.edu 37 3 49841795 49841795 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_203370.1 +1 validated p.R80M 0.355 9 0.000 41 0.293 3 0% possibly_damaging(0.496) tolerated(0.05) deleterious(0.511) NULL BAP1 8314 genome.wustl.edu 37 3 52437188 52437188 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004656.2 -1 reviewed p.G619D 0.164 21 0% 62 24.2% 50 40% benign(0.03) tolerated(0.49) neutral(0.012) NULL TKT 7086 genome.wustl.edu 37 3 53260820 53260820 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001064.2 -1 validated p.R550C 0.387 22 0% 52 23.1% 830 45.1% probably_damaging(0.992) deleterious(0) deleterious(0.892) HMMPfam_Transketolase_C,superfamily_TK C-terminal domain-like ABHD6 57406 genome.wustl.edu 37 3 58242351 58242351 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020676.5 +1 validated p.G13D 0.999 208 0% 377 26% 3 66.6% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL CADM2 253559 genome.wustl.edu 37 3 85932511 85932512 + Frame_Shift_Ins INS - - TC novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_153184.3 +1 validated p.D99fs 1.000:1.000 - - - - - - - - - HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 RG9MTD1 54931 genome.wustl.edu 37 3 101284382 101284382 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017819.2 +1 provisional p.A253T 0.002 130 0% 340 12.9% 67 13.4% benign(0.031) tolerated(0.46) neutral(0.013) HMMPfam_tRNA_m1G_MT ALCAM 214 genome.wustl.edu 37 3 105253592 105253592 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001627.2 +1 validated p.K211N 0.996 539 0% 808 23.1% 27 40.7% benign(0.006) deleterious(0) neutral(0.445) HMMPfam_C2-set_2,superfamily_Immunoglobulin BOC 91653 genome.wustl.edu 37 3 113004316 113004316 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_033254.2 +1 validated p.R1021C 0.171 33 0% 82 26.8% 13 15.3% benign(0.009) deleterious(0.02) neutral(0.384) NULL HSPBAP1 79663 genome.wustl.edu 37 3 122487561 122487561 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024610.4 -1 provisional p.T140I 0.996 86 0% 190 22.1% 0 - possibly_damaging(0.857) tolerated(0.19) neutral(0.381) HMMSmart_SM00558,superfamily_Clavaminate synthase-like UROC1 131669 genome.wustl.edu 37 3 126217004 126217004 + Missense_Mutation SNP G G C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_144639.2 -1 reviewed p.S443C 1.000 31 0% 124 21% 0 - probably_damaging(1) tolerated(0.24) deleterious(0.537) HMMPfam_Urocanase,superfamily_Urocanase PHC3 80012 genome.wustl.edu 37 3 169854431 169854431 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024947.3 -1 validated p.S232I 1.000 100 0% 179 22.3% 7 28.5% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL PIK3CA 5290 genome.wustl.edu 37 3 178916726 178916726 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006218.2 +1 reviewed p.R38H 1.000 195 0.5% 339 24.5% 1 100% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B MASP1 5648 genome.wustl.edu 37 3 186940968 186940968 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001879.5 -1 reviewed p.V586I 1.000 120 0% 292 19.2% 0 - possibly_damaging(0.929) deleterious(0.02) deleterious(0.759) HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases ATP13A3 79572 genome.wustl.edu 37 3 194157924 194157924 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024524.3 -1 validated p.V674I 1.000 262 0% 439 25.5% 13 53.8% benign(0.184) tolerated(0.44) neutral(0.030) HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M PDE6B 5158 genome.wustl.edu 37 4 647868 647868 + Splice_Site SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000283.3 +1 reviewed e5-1 1.000 9 0.000 19 0.263 0 - - - - - JAKMIP1 152789 genome.wustl.edu 37 4 6050598 6050599 + Frame_Shift_Ins INS - - A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001099433.1 -1 validated p.A671fs 1.000:1.000 - - - - - - - - - NULL PHOX2B 8929 genome.wustl.edu 37 4 41749385 41749385 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003924.3 -1 reviewed p.L137P 1.000 15 0% 31 25.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1 CWH43 80157 genome.wustl.edu 37 4 49034690 49034690 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_025087.2 +1 validated p.G539D 0.000 481 0.2% 867 25.6% 7 42.8% benign(0.021) tolerated(0.09) neutral(0.297) NULL IGFBP7 3490 genome.wustl.edu 37 4 57907078 57907078 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001553.1 -1 provisional p.P166H 1.000 69 0% 123 24.4% 645 12% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 LPHN3 23284 genome.wustl.edu 37 4 62453099 62453099 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015236.4 +1 reviewed p.P70 0.998 79 0% 131 21.4% 1 0% - - - HMMPfam_Gal_Lectin GUCY1A3 2982 genome.wustl.edu 37 4 156632113 156632113 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000856.4 +1 validated p.L266M 0.993 188 0% 307 22.5% 15 46.6% benign(0.089) tolerated(0.14) neutral(0.256) NULL SPOCK3 50859 genome.wustl.edu 37 4 167656103 167656103 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_016950.2 -1 validated p.D427G 1.000 194 0.5% 309 30.4% 0 - unknown(0) - - NULL DCTD 1635 genome.wustl.edu 37 4 183815663 183815663 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001012732.1 -1 reviewed p.A125T 1.000 41 0% 143 24.5% 111 46.8% possibly_damaging(0.724) tolerated(0.14) deleterious(0.512) HMMPfam_dCMP_cyt_deam_1,PatternScan_CYT_DCMP_DEAMINASES,superfamily_Cytidine_deaminase-like PDZD2 23037 genome.wustl.edu 37 5 31799764 31799764 + Nonsense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_178140.2 +1 reviewed p.R137* 1.000 52 0% 124 25.8% 0 - - - - HMMSmart_SM00228,superfamily_PDZ domain-like MAST4 375449 genome.wustl.edu 37 5 66462742 66462742 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015183.2 +1 validated p.G2390C 0.153 9 0.000 35 0.171 3 0% benign(0.009) tolerated(0.44) neutral(0.013) NULL F2R 2149 genome.wustl.edu 37 5 76028950 76028950 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001992.3 +1 reviewed p.S300 0.000 110 0% 191 24.1% 17 0% - - - HMMPfam_7tm_1,superfamily_SSF81321 PAPD4 167153 genome.wustl.edu 37 5 78919115 78919115 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001114393.1 +1 validated p.R90W 1.000 163 0% 322 23.6% 18 38.8% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PCDHB16 57717 genome.wustl.edu 37 5 140564387 140564387 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020957.1 +1 reviewed p.Y751 0.740 90 0% 190 21.1% 4 100% - - - NULL PCDHB15 56121 genome.wustl.edu 37 5 140627365 140627365 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018935.2 +1 reviewed p.S740N 0.003 68 0% 171 22.2% 1 0% benign(0.019) tolerated(0.13) neutral(0.254) NULL PCDHGA11 56105 genome.wustl.edu 37 5 140802949 140802949 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018914.2 +1 reviewed p.R719C 0.125 54 0% 95 33.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL PCDH12 51294 genome.wustl.edu 37 5 141324966 141324967 + In_Frame_Ins INS - - GCTGCTGCTGCTGCCGCC rs66773906 TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_016580.2 -1 reviewed p.1178in_frame_insGGSSSS 0.002:0.001 - - - - - - - - - NULL TCERG1 10915 genome.wustl.edu 37 5 145883505 145883506 + Frame_Shift_Del DEL GA GA - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 GA GA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006706.3 +1 reviewed p.E892fs 1.000:0.891 - - - - - - - - - superfamily_FF domain SLC6A7 6534 genome.wustl.edu 37 5 149582169 149582169 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014228.3 +1 validated p.N330 0.998 52 0% 124 18.5% 0 - - - - HMMPfam_SNF TIMD4 91937 genome.wustl.edu 37 5 156378762 156378762 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_138379.2 -1 validated p.R147H 0.000 447 0% 818 23.8% 1 100% possibly_damaging(0.907) tolerated(0.08) deleterious(0.660) NULL GABRP 2568 genome.wustl.edu 37 5 170235639 170235639 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014211.2 +1 reviewed p.R239W 0.570 76 0% 165 16.4% 2 0% possibly_damaging(0.913) deleterious(0) deleterious(0.809) HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like NSD1 64324 genome.wustl.edu 37 5 176638830 176638830 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_022455.4 +1 reviewed p.E1144K 1.000 216 0% 390 26.2% 13 61.5% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL HUS1B 135458 genome.wustl.edu 37 6 656846 656846 + Silent SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_148959.3 -1 reviewed p.R33 0.000 19 0% 53 22.6% 2 50% - - - HMMPfam_Hus1 WRNIP1 56897 genome.wustl.edu 37 6 2770469 2770469 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020135.2 +1 reviewed p.L377P 1.000 58 0% 118 21.2% 74 45.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases PRPF4B 8899 genome.wustl.edu 37 6 4031878 4031878 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003913.4 +1 reviewed p.H43Y 1.000 117 0% 295 22.4% 9 33.3% possibly_damaging(0.806) deleterious(0) deleterious(0.748) NULL DSP 1832 genome.wustl.edu 37 6 7580242 7580242 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004415.2 +1 reviewed p.N1273 0.041 146 0% 279 21.1% 30 36.6% - - - NULL ERVFRD-1 405754 genome.wustl.edu 37 6 11105491 11105491 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_207582.2 -1 validated p.R18H 0.613 78 0% 164 26.2% 0 - benign(0.022) deleterious(0.04) neutral(0.350) NULL DEK 7913 genome.wustl.edu 37 6 18237647 18237647 + Missense_Mutation SNP C C G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003472.3 -1 reviewed p.S288T 1.000 128 0% 247 27.9% 67 37.3% benign(0.016) tolerated(0.22) neutral(0.043) NULL ZNF322 79692 genome.wustl.edu 37 6 26638120 26638120 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024639.3 -1 validated p.R221Q 0.419 610 0% 994 14.8% 4 25% possibly_damaging(0.547) tolerated(0.06) deleterious(0.508) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 OR2B2 81697 genome.wustl.edu 37 6 27880073 27880073 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_033057.2 -1 validated p.P9T 0.003 244 0% 432 24.3% 0 - benign(0.001) tolerated(0.69) neutral(0.002) superfamily_Family A G protein-coupled receptor-like OR12D3 81797 genome.wustl.edu 37 6 29342631 29342631 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_030959.2 -1 provisional p.A145V 0.000 325 0% 403 27% 0 - benign(0) tolerated(0.26) neutral(0.034) HMMPfam_7tm_1,superfamily_SSF81321 KCNK16 83795 genome.wustl.edu 37 6 39282968 39282968 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001135105.1 -1 reviewed p.P301S 0.000 15 0% 40 20% 0 - unknown(0) - - NULL SLC22A7 10864 genome.wustl.edu 37 6 43270123 43270123 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_153320.2 +1 reviewed p.A416V 0.007 18 0% 58 32.8% 0 - benign(0.006) tolerated(0.57) neutral(0.006) HMMPfam_MFS_1,superfamily_MFS general substrate transporter GTPBP2 54676 genome.wustl.edu 37 6 43592647 43592647 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000442748 -1 known p.S252L 0.983 92 0% 186 29.6% 35 34.2% - - - HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases PGK2 5232 genome.wustl.edu 37 6 49754595 49754595 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_138733.4 -1 reviewed p.A102 0.218 307 0% 430 26.3% 0 - - - - HMMPfam_PGK,superfamily_PGK DST 667 genome.wustl.edu 37 6 56325046 56325046 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015548.4 -1 reviewed p.P5046S 1.000 127 0% 224 26.3% 18 22.2% benign(0.001) - - NULL MDN1 23195 genome.wustl.edu 37 6 90372658 90372658 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014611.1 -1 provisional p.E4755D 0.583 179 0% 315 24.8% 14 50% benign(0.039) tolerated(0.6) neutral(0.006) NULL MDN1 23195 genome.wustl.edu 37 6 90428609 90428609 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014611.1 -1 provisional p.G2066 0.261 128 0% 240 23.3% 3 33.3% - - - HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases MMS22L 253714 genome.wustl.edu 37 6 97720696 97720696 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_198468.2 -1 predicted p.A164T 1.000 428 0% 724 26.5% 6 16.6% possibly_damaging(0.643) deleterious(0.03) deleterious(0.590) NULL ROS1 6098 genome.wustl.edu 37 6 117674156 117674156 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002944.2 -1 reviewed p.P1440S 1.000 217 0% 368 24.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_SSF63825 LAMA2 3908 genome.wustl.edu 37 6 129714387 129714387 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000426.3 +1 reviewed p.M1811T 1.000 170 0% 266 18.8% 0 - benign(0.001) tolerated(0.32) neutral(0.024) superfamily_ConA_like_lec_gl,HMMPfam_Laminin_I VNN2 8875 genome.wustl.edu 37 6 133073626 133073626 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004665.2 -1 reviewed p.T267I 0.000 343 0% 663 25.6% 1 0% benign(0) tolerated(1) - superfamily_Ntlse/CNhydtse SHPRH 257218 genome.wustl.edu 37 6 146207903 146207903 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001042683.2 -1 validated p.K1663R 1.000 151 0% 224 22.3% 3 100% probably_damaging(0.998) tolerated(0.28) deleterious(0.506) NULL GRM1 2911 genome.wustl.edu 37 6 146350937 146350937 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000838.3 +1 reviewed p.L95P 1.000 100 0% 153 22.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_ANF_receptor,superfamily_SSF53822 CARD11 84433 genome.wustl.edu 37 7 2978411 2978411 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032415.3 -1 validated p.H307Y 1.000 18 0% 38 26.3% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL RNF216 54476 genome.wustl.edu 37 7 5781136 5781136 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_207111.2 -1 reviewed p.N171S 0.907 199 0% 454 26.7% 17 41.1% possibly_damaging(0.875) tolerated(0.15) deleterious(0.581) NULL PMS2 5395 genome.wustl.edu 37 7 6029581 6029581 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000535.5 -1 reviewed p.V332I 1.000 74 0% 195 24.1% 7 42.8% possibly_damaging(0.662) tolerated(0.11) deleterious(0.506) HMMPfam_DNA_mis_repair,superfamily_Ribosomal protein S5 domain 2-like CCZ1B 221960 genome.wustl.edu 37 7 6862965 6862965 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_198097.2 -1 predicted p.R139 0.987 46 0% 112 21.4% 65 16.9% - - - HMMPfam_DUF2049 PKD1L1 168507 genome.wustl.edu 37 7 47925508 47925508 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_138295.2 -1 reviewed p.P994L 0.000 91 0% 202 25.2% 0 - probably_damaging(0.978) deleterious(0.01) deleterious(0.826) NULL ZPBP 11055 genome.wustl.edu 37 7 49977133 49977133 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_007009.2 -1 validated p.T349 0.000 333 0% 440 21.6% 0 - - - - HMMPfam_Sp38 CCT6A 908 genome.wustl.edu 37 7 56127968 56127968 + Missense_Mutation SNP G G C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001762.3 +1 reviewed p.E358Q 1.000 83 0% 143 23.8% 344 46.5% benign(0.041) tolerated(0.06) neutral(0.325) HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849 ELN 2006 genome.wustl.edu 37 7 73462835 73462835 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000501.2 +1 reviewed p.V250I 0.837 60 0% 166 32.5% 19 10.5% unknown(0) tolerated(0.05) - NULL PTPN12 5782 genome.wustl.edu 37 7 77240266 77240266 + Missense_Mutation SNP A A T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002835.3 +1 reviewed p.E281V 1.000 286 0.3% 476 25% 22 50% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 DBF4 10926 genome.wustl.edu 37 7 87533610 87533610 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006716.3 +1 validated p.L310I 1.000 100 0% 137 19.7% 14 42.8% probably_damaging(0.975) tolerated(0.11) deleterious(0.689) HMMPfam_zf-DBF,HMMSmart_SM00586 ZNF804B 219578 genome.wustl.edu 37 7 88964105 88964105 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_181646.2 +1 provisional p.K603N 0.004 305 0% 413 27.4% 0 - benign(0.072) deleterious(0) neutral(0.450) NULL ANKIB1 54467 genome.wustl.edu 37 7 92015852 92015852 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_019004.1 +1 validated p.L549 0.996 83 0% 136 25% 12 25% unknown(0) - - HMMSmart_RING,HMMPfam_IBR,HMMSmart_IBR,superfamily_SSF57850 ANKIB1 54467 genome.wustl.edu 37 7 92027051 92027051 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_019004.1 +1 validated p.G804S 0.876 209 0% 319 27.3% 17 52.9% benign(0) deleterious(0) neutral(0.445) NULL ZSCAN21 7589 genome.wustl.edu 37 7 99661969 99661969 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_145914.2 +1 validated p.G384V 1.000 103 0% 225 24% 20 45% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_C2H2 and C2HC zinc fingers C7orf43 55262 genome.wustl.edu 37 7 99754077 99754077 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018275.3 -1 predicted p.T391M 0.971 25 0% 98 22.4% 38 52.6% probably_damaging(0.987) deleterious(0) deleterious(0.881) NULL KCND2 3751 genome.wustl.edu 37 7 119915105 119915105 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_012281.2 +1 reviewed p.R140H 1.000 79 0% 93 31.2% 1 0% probably_damaging(0.96) tolerated(0.08) deleterious(0.703) HMMSmart_SM00225,superfamily_POZ domain CRYGN 155051 genome.wustl.edu 37 7 151135009 151135009 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000491928 -1 known p.A115T 0.000 12 0% 36 27.8% 0 - benign(0.017) - - NULL FBXO16 157574 genome.wustl.edu 37 8 28314442 28314442 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_172366.2 -1 reviewed p.C116 1.000 135 0% 263 29.7% 4 50% - - - HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF81383 RAB11FIP1 80223 genome.wustl.edu 37 8 37729377 37729377 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001002814.2 -1 validated p.Q981H 0.014 130 0% 385 26.2% 9 33.3% possibly_damaging(0.896) deleterious(0) deleterious(0.798) NULL LYN 4067 genome.wustl.edu 37 8 56859038 56859038 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002350.2 +1 validated p.R55M 1.000 119 0% 267 22.1% 16 6.2% benign(0.025) tolerated(0.12) neutral(0.262) superfamily_SH3-domain PENK 5179 genome.wustl.edu 37 8 57354238 57354238 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001135690.1 -1 validated p.A133T 0.580 146 0% 268 28% 0 - benign(0.002) tolerated(0.2) neutral(0.049) NULL COPS5 10987 genome.wustl.edu 37 8 67958163 67958163 + Missense_Mutation SNP A A T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006837.2 -1 reviewed p.D268E 1.000 96 0% 202 26.2% 157 48.4% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL SLC10A5 347051 genome.wustl.edu 37 8 82606559 82606559 + Nonsense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001010893.2 -1 validated p.G217* 1.000 250 0% 439 23.2% 0 - - - - HMMPfam_SBF PKHD1L1 93035 genome.wustl.edu 37 8 110493694 110493694 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_177531.4 +1 validated p.N3120K 0.705 27 0% 37 24.3% 0 - benign(0.023) tolerated(0.43) neutral(0.014) superfamily_Pectin lyase-like,HMMPfam_G8 LRRC6 23639 genome.wustl.edu 37 8 133623559 133623559 + Missense_Mutation SNP C C G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_012472.3 -1 provisional p.R342P 1.000 95 0% 130 26.2% 6 83.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_CS FAM135B 51059 genome.wustl.edu 37 8 139164400 139164400 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015912.3 -1 validated p.A773V 1.000 127 0% 249 20.5% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL COL22A1 169044 genome.wustl.edu 37 8 139838949 139838949 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_152888.1 -1 validated p.K307 0.764 82 0% 201 27.4% 0 - - - - HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases HEATR7A 727957 genome.wustl.edu 37 8 145235128 145235128 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032450.2 +1 provisional p.A116 0.056 7 0.000 27 0.370 16 37.5% - - - superfamily_ARM repeat ADCK5 203054 genome.wustl.edu 37 8 145616097 145616097 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_174922.3 +1 validated p.Q128 1.000 5 0.000 10 0.400 12 58.3% possibly_damaging(0.819) deleterious(0) deleterious(0.754) NULL TAF1L 138474 genome.wustl.edu 37 9 32635156 32635156 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_153809.2 -1 provisional p.D141G 1.000 209 0% 398 20.9% 1 0% probably_damaging(0.998) tolerated(0.17) deleterious(0.533) NULL OR2S2 56656 genome.wustl.edu 37 9 35957425 35957425 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_019897.2 -1 provisional p.T224I 0.022 179 0% 347 27.7% 0 - benign(0.001) tolerated(0.37) neutral(0.019) HMMPfam_7tm_1,superfamily_SSF81321 CCIN 881 genome.wustl.edu 37 9 36170084 36170084 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005893.2 +1 reviewed p.D195E 1.000 81 0% 212 24.5% 1 0% probably_damaging(0.99) tolerated(1) neutral(0.442) HMMPfam_BACK PIP5K1B 8395 genome.wustl.edu 37 9 71555691 71555691 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003558.2 +1 validated p.T496I 0.002 300 0% 486 23.9% 9 33.3% benign(0.001) tolerated(0.17) neutral(0.059) NULL FAM120A 23196 genome.wustl.edu 37 9 96305695 96305695 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014612.3 +1 validated p.A701T 1.000 166 0% 301 22.3% 127 46.4% possibly_damaging(0.856) tolerated(0.6) neutral(0.335) NULL STX17 55014 genome.wustl.edu 37 9 102713458 102713458 + Silent SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017919.2 +1 validated p.T102 0.037 189 0% 382 26.2% 12 41.6% - - - superfamily_t-snare ACTL7A 10881 genome.wustl.edu 37 9 111624837 111624837 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006687.2 +1 reviewed p.G79C 1.000 32 0% 91 28.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain DAB2IP 153090 genome.wustl.edu 37 9 124544691 124544691 + Nonsense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_138709.1 +1 validated p.Q1038* 1.000 136 0% 451 25.9% 36 33.3% - - - NULL OLFML2A 169611 genome.wustl.edu 37 9 127572171 127572171 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_182487.2 +1 validated p.R480H 1.000 24 0% 91 26.4% 4 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_OLF,HMMSmart_SM00284 SPTAN1 6709 genome.wustl.edu 37 9 131388219 131388221 + In_Frame_Del DEL AAG AAG - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 AAG AAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001130438.1 +1 validated p.K2083in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin QRFP 347148 genome.wustl.edu 37 9 133768858 133768858 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_198180.1 -1 validated p.S123N 0.996 10 0% 49 16.3% 1 0% probably_damaging(0.979) deleterious(0) deleterious(0.867) NULL TSC1 7248 genome.wustl.edu 37 9 135780991 135780991 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000368.4 -1 reviewed p.D658 0.974 97 0% 184 28.3% 5 80% - - - HMMPfam_Hamartin CEL 1056 genome.wustl.edu 37 9 135940444 135940444 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001807.3 +1 reviewed p.V123I 0.452 11 0% 37 32.4% 4 25% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases RPL7A 6130 genome.wustl.edu 37 9 136216773 136216773 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000972.2 +1 reviewed p.Q94R 1.000 18 0% 54 24.1% 1384 45.5% benign(0.364) deleterious(0.01) deleterious(0.522) superfamily_L30e-like KIAA1217 56243 genome.wustl.edu 37 10 24802284 24802284 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_019590.3 +1 validated p.V700M 0.995 125 0% 216 25% 35 42.8% probably_damaging(0.992) deleterious(0.02) deleterious(0.831) NULL SVIL 6840 genome.wustl.edu 37 10 29747374 29747374 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_021738.2 -1 reviewed p.E2183K 1.000 97 0% 197 22.8% 24 33.3% benign(0.003) tolerated(0.13) neutral(0.253) HMMPfam_VHP,HMMSmart_SM00153,superfamily_VHP Villin headpiece domain OGDHL 55753 genome.wustl.edu 37 10 50953993 50953993 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018245.2 -1 validated p.R443S 1.000 21 0% 70 28.6% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_E1_dh,superfamily_SSF52518 ARID5B 84159 genome.wustl.edu 37 10 63661967 63661967 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032199.2 +1 validated p.A24D 1.000 108 0% 212 23.1% 6 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL NDST2 8509 genome.wustl.edu 37 10 75567668 75567668 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003635.3 -1 reviewed p.Y160C 1.000 49 0% 158 29.1% 7 71.4% probably_damaging(1) deleterious(0) deleterious(0.945) NULL KAT6B 23522 genome.wustl.edu 37 10 76781908 76781908 + Silent SNP A A G rs79644703 TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_012330.2 +1 validated p.E1097 0.213 195 8.2% 260 18.1% 2 50% - - - NULL PTEN 5728 genome.wustl.edu 37 10 89720799 89720802 + Frame_Shift_Del DEL TACT TACT - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 TACT TACT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000371953 +1 known p.T319fs 1.000:1.000:1.000:1.000 - - - - - - - - - superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2 CYP2C19 1557 genome.wustl.edu 37 10 96535189 96535189 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000769.1 +1 reviewed p.R125H 0.957 473 0% 774 22.6% 0 - benign(0.298) tolerated(0.05) neutral(0.438) HMMPfam_p450,superfamily_Cytochrome_P450 MUC5B 727897 genome.wustl.edu 37 11 1267708 1267708 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002458.1 +1 validated p.A3203T 0.000 34 0% 86 25.6% 28 14.2% unknown(0) - - NULL OR52L1 338751 genome.wustl.edu 37 11 6007817 6007817 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001005173.2 -1 validated p.C115F 0.998 140 0% 274 26.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like TUB 7275 genome.wustl.edu 37 11 8118348 8118348 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003320.4 +1 reviewed p.V283I 0.010 46 0% 161 23% 0 - benign(0.001) tolerated(0.47) neutral(0.011) NULL AMBRA1 55626 genome.wustl.edu 37 11 46568747 46568747 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017749.2 -1 validated p.P98 0.088 314 0% 593 22.1% 13 38.4% - - - HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40 FNBP4 23360 genome.wustl.edu 37 11 47744609 47744609 + Silent SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015308.2 -1 validated p.P908 0.770 57 0% 131 27.5% 57 61.4% - - - NULL OR8J3 81168 genome.wustl.edu 37 11 55904448 55904448 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001004064.1 -1 provisional p.T249 0.000 206 0% 301 27.9% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 CTNND1 1500 genome.wustl.edu 37 11 57582937 57582937 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001085458.1 +1 validated p.D925N 0.859 107 0% 196 28.1% 125 40.8% benign(0) deleterious(0) neutral(0.445) NULL ZFP91 80829 genome.wustl.edu 37 11 58385170 58385170 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_053023.3 +1 reviewed p.A568 0.985 318 0% 393 20.6% 36 25% - - - NULL SAC3D1 29901 genome.wustl.edu 37 11 64812014 64812014 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_013299.3 +1 validated p.G298R 0.997 13 0% 48 33.3% 105 38% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL POLA2 23649 genome.wustl.edu 37 11 65036153 65036155 + In_Frame_Del DEL GAA GAA - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 GAA GAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002689.2 +1 provisional p.E106in_frame_del 1.000:1.000:0.998 - - - - - - - - - HMMPfam_Pol_alpha_B_N ENSG00000234376 0 genome.wustl.edu 37 11 89486327 89486327 + Missense_Mutation SNP T T G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000411859 -1 known p.K270Q 0.990 233 0% 363 20.7% 0 - - - - HMMSmart_SM00398,superfamily_HMG-box FAT3 120114 genome.wustl.edu 37 11 92616547 92616547 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001008781.2 +1 validated p.A4309T 0.000 45 0% 71 23.9% 0 - benign(0) tolerated(0.46) neutral(0.012) NULL DDI1 414301 genome.wustl.edu 37 11 103908618 103908618 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001001711.2 +1 validated p.T356 0.424 85 0% 202 30.2% 0 - - - - NULL ANKK1 255239 genome.wustl.edu 37 11 113267969 113267969 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_178510.1 +1 reviewed p.L288 1.000 20 0% 74 32.4% 0 - - - - NULL VPS11 55823 genome.wustl.edu 37 11 118944057 118944057 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000300793 +1 known p.R344L 1.000 29 0% 47 25.5% 17 47% - - - NULL OR4D5 219875 genome.wustl.edu 37 11 123810512 123810512 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001001965.1 +1 provisional p.L63F 0.001 305 0% 450 28% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like FGF6 2251 genome.wustl.edu 37 12 4553370 4553370 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020996.1 -1 reviewed p.V127M 0.998 61 0% 167 24.6% 0 - benign(0.003) deleterious(0.01) neutral(0.406) HMMPfam_FGF,HMMSmart_FGF,superfamily_Cytok_IL1_like VWF 7450 genome.wustl.edu 37 12 6094265 6094265 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000552.3 -1 reviewed p.E2308K 1.000 57 0% 180 21.7% 70 1.4% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1 CD163L1 283316 genome.wustl.edu 37 12 7528075 7528075 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_174941.4 -1 reviewed p.R935C 0.119 204 0% 257 22.2% 0 - benign(0.274) deleterious(0.02) neutral(0.412) HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like PLBD1 79887 genome.wustl.edu 37 12 14695180 14695180 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024829.5 -1 validated p.T127 0.962 108 0% 267 21.7% 3 0% - - - HMMPfam_Phospholip_B PLCZ1 89869 genome.wustl.edu 37 12 18852862 18852862 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_033123.2 -1 provisional p.L347P 0.921 127 0% 166 20.5% 0 - benign(0) tolerated(0.26) neutral(0.034) superfamily_PLC-like phosphodiesterases ABCC9 10060 genome.wustl.edu 37 12 22089475 22089475 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005691.2 -1 reviewed p.L45S 1.000 132 0% 214 19.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL KRAS 3845 genome.wustl.edu 37 12 25398284 25398284 + Missense_Mutation SNP C C A rs121913529 byCluster TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_033360.2 -1 reviewed p.G12V 1.000 38 0% 91 15.4% 7 42.8% benign(0.048) deleterious(0) neutral(0.448) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases OVCH1 341350 genome.wustl.edu 37 12 29604402 29604402 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_183378.2 -1 validated p.L877 0.132 146 0% 212 26.9% 0 - - - - HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain MLL2 8085 genome.wustl.edu 37 12 49427932 49427932 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003482.3 -1 validated p.G3553D 1.000 58 0% 120 28.3% 8 50% unknown(0) - - NULL GALNT6 11226 genome.wustl.edu 37 12 51749682 51749682 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_007210.3 -1 reviewed p.H555Y 0.735 79 0% 220 27.3% 19 63.1% possibly_damaging(0.582) deleterious(0.01) deleterious(0.606) HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,superfamily_RicinB_like LOC100129509 100129509 genome.wustl.edu 37 12 52770961 52770961 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b XM_001718424.1 +1 model p.I156 0.001 1 0.000 4 1.000 0 - - - - NULL SUOX 6821 genome.wustl.edu 37 12 56398240 56398240 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000456.2 +1 reviewed p.P356H 1.000 31 0% 62 16.1% 43 48.8% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Oxidored_molyb,superfamily_Oxidored_molyb ZC3H10 84872 genome.wustl.edu 37 12 56514483 56514483 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032786.1 +1 provisional p.L46S 1.000 25 0% 90 26.7% 10 30% probably_damaging(0.981) deleterious(0) deleterious(0.870) HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1 LRP1 4035 genome.wustl.edu 37 12 57589126 57589126 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002332.2 +1 reviewed p.C2794Y 1.000 31 0% 123 24.4% 10 10% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,superfamily_YWTD domain NAV3 89795 genome.wustl.edu 37 12 78516181 78516181 + Missense_Mutation SNP G G C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014903.4 +1 validated p.G1404A 1.000 328 0.3% 403 20.3% 0 - possibly_damaging(0.944) deleterious(0.01) deleterious(0.794) NULL NAV3 89795 genome.wustl.edu 37 12 78593227 78593227 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014903.4 +1 validated p.V2189I 1.000 177 0% 231 21.6% 1 0% benign(0) tolerated(0.49) neutral(0.011) superfamily_P-loop containing nucleoside triphosphate hydrolases LRRIQ1 84125 genome.wustl.edu 37 12 85449933 85449933 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001079910.1 +1 validated p.Q454 0.000 321 0% 442 22.2% 1 100% - - - superfamily_RNI-like AMDHD1 144193 genome.wustl.edu 37 12 96360210 96360210 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_152435.2 +1 validated p.A373T 1.000 126 0% 262 21.4% 1 0% possibly_damaging(0.866) deleterious(0.01) deleterious(0.741) HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases SLC17A8 246213 genome.wustl.edu 37 12 100806569 100806569 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_139319.2 +1 reviewed p.L403S 1.000 233 0% 481 24.5% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_MFS_1,superfamily_MFS general substrate transporter CHPT1 56994 genome.wustl.edu 37 12 102116985 102116987 + In_Frame_Del DEL ATT ATT - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 ATT ATT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020244.2 +1 validated p.I276in_frame_del 0.996:1.000:1.000 - - - - - - - - - PatternScan_LIPOYL RPLP0 6175 genome.wustl.edu 37 12 120636713 120636713 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001002.3 -1 reviewed p.F137L 1.000 35 0% 59 22% 3517 43.5% probably_damaging(0.995) deleterious(0) deleterious(0.902) NULL GPR133 283383 genome.wustl.edu 37 12 131451055 131451055 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_198827.3 +1 validated p.V51M 0.998 76 0% 163 21.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_Concanavalin A-like lectins/glucanases OLFM4 10562 genome.wustl.edu 37 13 53608532 53608532 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006418.3 +1 reviewed p.C85Y 1.000 238 0% 422 27.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL REC8 9985 genome.wustl.edu 37 14 24648929 24648929 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001048205.1 +1 reviewed p.H482R 0.998 19 0% 63 34.9% 191 45.5% benign(0.304) tolerated(0.34) neutral(0.117) NULL TINF2 26277 genome.wustl.edu 37 14 24710280 24710280 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001099274.1 -1 reviewed p.T184A 0.214 311 0% 867 25.4% 46 43.4% possibly_damaging(0.889) tolerated(0.05) deleterious(0.695) NULL FAM179B 23116 genome.wustl.edu 37 14 45512906 45512906 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015091.2 +1 validated p.G1277E 1.000 82 0% 110 22.7% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM repeat LGMN 5641 genome.wustl.edu 37 14 93178208 93178208 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001008530.1 -1 reviewed p.V235I 1.000 93 0% 195 27.7% 86 26.7% possibly_damaging(0.95) tolerated(0.13) deleterious(0.646) HMMPfam_Peptidase_C13 GPR132 29933 genome.wustl.edu 37 14 105517999 105517999 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_013345.2 -1 reviewed p.A159T 0.999 11 0% 48 29.2% 0 - probably_damaging(0.974) deleterious(0) deleterious(0.861) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like CYFIP1 23191 genome.wustl.edu 37 15 22958214 22958214 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014608.2 +1 validated p.S619 0.495 28 0% 68 27.9% 70 42.8% - - - HMMPfam_FragX_IP HERC2 8924 genome.wustl.edu 37 15 28525245 28525245 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004667.4 -1 reviewed p.G171C 0.820 129 0% 242 29.8% 6 50% benign(0.005) deleterious(0.05) neutral(0.345) NULL TJP1 7082 genome.wustl.edu 37 15 30065521 30065521 + Nonsense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003257.3 -1 validated p.R42* 1.000 295 0% 518 22% 9 11.1% - - - HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like RYR3 6263 genome.wustl.edu 37 15 33795849 33795849 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001036.3 +1 validated p.L63 1.000 72 0% 154 26% 0 - - - - HMMPfam_Ins145_P3_rec RYR3 6263 genome.wustl.edu 37 15 34064310 34064310 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001036.3 +1 validated p.T3002 0.007 55 0% 112 25.9% 0 - - - - NULL RYR3 6263 genome.wustl.edu 37 15 34130646 34130646 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001036.3 +1 validated p.D4155 0.000 120 0% 230 27.8% 0 - - - - NULL EIF2AK4 440275 genome.wustl.edu 37 15 40324439 40324440 + Splice_Site INS - - T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001013703.2 +1 validated e36+1 1.000:1.000 - - - - - - - - - - C15orf52 388115 genome.wustl.edu 37 15 40630783 40630783 + Nonsense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_207380.2 -1 validated p.R200* 0.004 49 0% 172 26.2% 1 0% - - - NULL ZSCAN29 146050 genome.wustl.edu 37 15 43661280 43661280 + Missense_Mutation SNP T T G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_152455.3 -1 validated p.T122P 0.996 113 0% 244 24.2% 10 30% unknown(0) tolerated(0.28) - HMMSmart_SM00431 PYGO1 26108 genome.wustl.edu 37 15 55838599 55838599 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015617.1 -1 provisional p.A294 0.088 505 0% 742 23.2% 4 75% - - - NULL HSP90AB4P 664618 genome.wustl.edu 37 15 58983315 58983315 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000380522 -1 known p.S502N 1.000 184 0% 323 29.4% 0 - - - - HMMPfam_HSP90,superfamily_SSF110942 NARG2 79664 genome.wustl.edu 37 15 60768325 60768325 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024611.4 -1 validated p.R28Q 1.000 95 0% 163 20.2% 8 25% benign(0.017) tolerated(0.37) neutral(0.019) NULL ANKDD1A 348094 genome.wustl.edu 37 15 65239656 65239656 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_182703.3 +1 validated p.L398 0.965 55 0% 66 28.8% 1 0% - - - NULL IQCH 64799 genome.wustl.edu 37 15 67677306 67677306 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001031715.2 +1 validated p.D469N 0.082 342 0% 490 22.7% 1 100% probably_damaging(0.988) tolerated(0.64) neutral(0.441) NULL SGK269 79834 genome.wustl.edu 37 15 77474084 77474084 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024776.2 -1 validated p.R62Q 1.000 311 0% 456 26.1% 6 50% probably_damaging(0.998) deleterious(0.02) deleterious(0.857) NULL TBC1D2B 23102 genome.wustl.edu 37 15 78317679 78317679 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000418039 -1 known p.R218Q 0.000 81 0% 207 22.2% 2 0% - - - NULL AGPHD1 123688 genome.wustl.edu 37 15 78805643 78805643 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001013619.2 +1 validated p.A71 0.022 146 0% 337 22% 4 75% - - - HMMPfam_APH,superfamily_Protein kinase-like (PK-like) ADAMTSL3 57188 genome.wustl.edu 37 15 84553879 84553879 + Silent SNP C C T rs140676489 by1000genomes TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_207517.2 +1 validated p.S329 0.929 63 0% 92 31.5% 0 - - - - NULL DET1 55070 genome.wustl.edu 37 15 89074479 89074479 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017996.3 -1 validated p.C164Y 0.991 63 0% 114 24.6% 2 50% benign(0) tolerated(1) - HMMPfam_Det1 CERS3 204219 genome.wustl.edu 37 15 101013146 101013146 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_178842.3 -1 validated p.A241T 0.995 226 0% 401 21.7% 0 - benign(0.016) deleterious(0.01) neutral(0.406) HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724 CREBBP 1387 genome.wustl.edu 37 16 3843499 3843500 + Frame_Shift_Ins INS - - T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004380.2 -1 reviewed p.R369fs 1.000:1.000 - - - - - - - - - HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,superfamily_TAZ_finger TXNDC11 51061 genome.wustl.edu 37 16 11785669 11785669 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015914.5 -1 provisional p.S459 0.351 113 0% 205 25.9% 20 30% - - - NULL KIAA0430 9665 genome.wustl.edu 37 16 15716920 15716920 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014647.3 -1 validated p.S777 0.001 81 0% 224 26.8% 7 42.8% - - - superfamily_RNA-binding domain RBD ABCC1 4363 genome.wustl.edu 37 16 16218681 16218681 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004996.3 +1 reviewed p.C1209Y 1.000 62 0% 151 25.2% 38 60.5% possibly_damaging(0.463) deleterious(0.03) deleterious(0.516) HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain ZP2 7783 genome.wustl.edu 37 16 21222863 21222863 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003460.1 -1 reviewed p.A2 0.000 167 0% 367 28.3% 0 - - - - NULL PLK1 5347 genome.wustl.edu 37 16 23695396 23695396 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005030.3 +1 provisional p.T341I 0.954 187 0% 431 25.1% 55 38.1% benign(0.003) tolerated(0.24) neutral(0.037) NULL COQ9 57017 genome.wustl.edu 37 16 57492180 57492180 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_020312.1 +1 provisional p.P210H 1.000 28 0% 68 29.4% 173 46.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_COQ9 CNGB1 1258 genome.wustl.edu 37 16 57983298 57983298 + Silent SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001297.4 -1 reviewed p.E360 0.002 84 0% 225 22.2% 0 - - - - NULL CTCF 10664 genome.wustl.edu 37 16 67654642 67654642 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006565.2 +1 reviewed p.R377C 1.000 191 0% 487 27.7% 49 48.9% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_C2H2 and C2HC zinc fingers CDH1 999 genome.wustl.edu 37 16 68847285 68847285 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004360.3 +1 reviewed p.A403T 0.000 221 0% 456 24.3% 141 48.2% benign(0.132) tolerated(0.18) neutral(0.067) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like BCMO1 53630 genome.wustl.edu 37 16 81324077 81324077 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017429.2 +1 reviewed p.L513 0.979 94 0% 223 30.5% 1 100% - - - HMMPfam_RPE65 BCL6B 255877 genome.wustl.edu 37 17 6928019 6928020 + In_Frame_Ins INS - - CAG novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_181844.3 +1 validated p.238in_frame_insS 0.939:0.528 - - - - - - - - - NULL NEURL4 84461 genome.wustl.edu 37 17 7226363 7226363 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032442.2 -1 validated p.R833C 0.993 8 0.000 29 0.276 17 47% possibly_damaging(0.948) deleterious(0) deleterious(0.836) HMMSmart_SM00588 DNAH9 1770 genome.wustl.edu 37 17 11540095 11540095 + Nonsense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001372.3 +1 reviewed p.E594* 0.358 116 0% 267 20.6% 0 - - - - HMMPfam_DHC_N1 LOC732391 732391 genome.wustl.edu 37 17 15469537 15469537 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b XM_001722159.1 -1 model p.Q14 0.772 77 0% 164 25.6% 1 100% - - - NULL ACACA 31 genome.wustl.edu 37 17 35591988 35591988 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_198834.1 -1 reviewed p.L1050F 0.999 163 0% 278 21.6% 21 42.8% benign(0.016) deleterious(0) neutral(0.445) HMMPfam_ACC_central KRTAP4-12 83755 genome.wustl.edu 37 17 39279929 39279929 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_031854.2 -1 reviewed p.S149N 0.998 46 0% 82 25.6% 0 - unknown(0) deleterious(0.04) - HMMPfam_Keratin_B2 VAT1 10493 genome.wustl.edu 37 17 41170690 41170690 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006373.3 -1 validated p.N172D 1.000 17 0% 59 15.3% 147 41.4% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) superfamily_GroES-like,superfamily_NAD(P)-binding Rossmann-fold domains NPEPPS 9520 genome.wustl.edu 37 17 45669428 45669429 + Splice_Site INS - - AAA novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006310.3 +1 reviewed e11+2 1.000:1.000 - - - - - - - - - - PDK2 5164 genome.wustl.edu 37 17 48185985 48185985 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002611.3 +1 provisional p.R291 1.000 17 0% 61 29.5% 21 42.8% - - - HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase SCN4A 6329 genome.wustl.edu 37 17 62018998 62018998 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_000334.4 -1 reviewed p.S1548 0.973 14 0% 53 24.5% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels ABCA9 10350 genome.wustl.edu 37 17 66978725 66978725 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_080283.3 -1 reviewed p.Q1566H 0.994 373 0% 630 25.2% 2 50% benign(0.037) tolerated(0.15) neutral(0.243) NULL CCDC40 55036 genome.wustl.edu 37 17 78073453 78073453 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017950.2 +1 validated p.R1103Q 0.649 15 0% 39 30.8% 8 62.5% probably_damaging(0.999) deleterious(0.05) deleterious(0.836) NULL C18orf1 753 genome.wustl.edu 37 18 13645227 13645227 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_181481.3 +1 validated p.H164 0.985 72 0% 157 24.8% 2 50% - - - NULL NOL4 8715 genome.wustl.edu 37 18 31432882 31432882 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003787.3 -1 validated p.A614V 1.000 179 0% 241 22.8% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL PIK3C3 5289 genome.wustl.edu 37 18 39638012 39638012 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002647.2 +1 validated p.R810Q 1.000 209 0% 276 24.3% 40 47.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like SETBP1 26040 genome.wustl.edu 37 18 42531203 42531203 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015559.2 +1 validated p.A633V 1.000 213 0% 374 23.8% 0 - benign(0.003) tolerated(0.57) neutral(0.006) NULL ATP5A1 498 genome.wustl.edu 37 18 43666116 43666116 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001001937.1 -1 reviewed p.G464 0.989 93 0% 299 29.4% 819 44.4% - - - HMMPfam_ATP-synt_ab_C,superfamily_C-terminal domain of alpha and beta subunits of F1 ATP synthase ARID3A 1820 genome.wustl.edu 37 19 964331 964331 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005224.2 +1 reviewed p.G284S 1.000 6 0.000 23 0.348 19 42.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_ARID,HMMSmart_BRIGHT,superfamily_ARID AP3D1 8943 genome.wustl.edu 37 19 2109918 2109918 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_003938.5 -1 validated p.L1040 0.990 13 0% 40 30% 170 39.4% - - - HMMPfam_BLVR SEMA6B 10501 genome.wustl.edu 37 19 4546261 4546261 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_032108.2 -1 reviewed p.G569R 0.999 4 0.000 14 0.571 7 0% benign(0.016) tolerated(0.38) neutral(0.018) HMMPfam_PSI,superfamily_Plexin repeat LRRC8E 80131 genome.wustl.edu 37 19 7965387 7965387 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_025061.3 +1 validated p.L660 0.950 4 0.000 20 0.350 25 60% - - - HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058 MUC16 94025 genome.wustl.edu 37 19 9066389 9066389 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024690.2 -1 validated p.S7019 0.000 437 0.2% 850 29.2% 3 100% - - - NULL CYP4F2 8529 genome.wustl.edu 37 19 16000324 16000324 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001082.3 -1 reviewed p.R276H 0.010 297 0% 686 23.9% 0 - benign(0.016) tolerated(0.12) neutral(0.261) HMMPfam_p450,superfamily_Cytochrome_P450 IL12RB1 3594 genome.wustl.edu 37 19 18170850 18170850 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005535.1 -1 reviewed p.L613M 0.001 20 0% 77 22.1% 1 100% possibly_damaging(0.852) tolerated(0.21) neutral(0.371) NULL LOC100288150 100288150 genome.wustl.edu 37 19 18652805 18652805 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b XM_002343620.1 +1 model p.P163T 0.988 8 0.000 13 0.385 147 48.2% unknown(0) - - NULL LOC100130518 100130518 genome.wustl.edu 37 19 22486073 22486073 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b XM_001719773.2 +1 model p.G32D 0.011 8 0.000 18 0.278 0 - - - - NULL LIPE 3991 genome.wustl.edu 37 19 42911801 42911801 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_005357.2 -1 reviewed p.P600H 0.996 35 0% 78 37.2% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HSL_N,superfamily_alpha/beta-Hydrolases IRGC 56269 genome.wustl.edu 37 19 44222989 44222989 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_019612.3 +1 validated p.T93 0.000 9 0.000 40 0.275 0 - - - - HMMPfam_IIGP,superfamily_SSF52540 ZNF230 7773 genome.wustl.edu 37 19 44514489 44514489 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006300.3 +1 validated p.A100T 0.001 121 0% 230 21.7% 4 75% benign(0.418) tolerated(0.22) neutral(0.178) NULL MARK4 57787 genome.wustl.edu 37 19 45762308 45762308 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_031417.2 +1 provisional p.L38P 1.000 9 0.000 27 0.259 13 23% benign(0.001) tolerated(0.27) neutral(0.034) superfamily_Kinase_like FOSB 2354 genome.wustl.edu 37 19 45976113 45976113 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006732.2 +1 reviewed p.Q287R 0.999 27 0% 114 15.8% 5 40% possibly_damaging(0.776) deleterious(0) deleterious(0.734) NULL PTOV1 53635 genome.wustl.edu 37 19 50360315 50360315 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_017432.3 +1 provisional p.F214L 1.000 18 0% 130 31.5% 220 34.5% probably_damaging(0.999) tolerated(0.21) deleterious(0.534) NULL MYH14 79784 genome.wustl.edu 37 19 50753079 50753079 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001077186.1 +1 reviewed p.P552L 1.000 48 0% 140 25% 72 55.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases ZNF470 388566 genome.wustl.edu 37 19 57088381 57088381 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001001668.3 +1 validated p.M195T 0.000 100 0% 202 23.8% 1 100% benign(0.006) tolerated(0.71) neutral(0.002) NULL RALGAPA2 57186 genome.wustl.edu 37 20 20563839 20563839 + Silent SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000430436 -1 known p.A671V 0.826 149 0% 180 18.9% 5 20% - - - NULL ADNP 23394 genome.wustl.edu 37 20 49509055 49509055 + Missense_Mutation SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015339.2 -1 reviewed p.L732F 0.743 132 0% 243 26.3% 17 23.5% benign(0.167) deleterious(0.02) neutral(0.398) NULL ADNP 23394 genome.wustl.edu 37 20 49509056 49509056 + Nonsense_Mutation SNP A A T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015339.2 -1 reviewed p.L732* 0.896 126 0% 244 26.6% 17 23.5% - - - NULL CDH26 60437 genome.wustl.edu 37 20 58564003 58564003 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_177980.2 +1 reviewed p.V356 0.000 94 0% 218 18.3% 0 - - - - HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin GTPBP5 26164 genome.wustl.edu 37 20 60775804 60775804 + Silent SNP A A C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_015666.3 +1 validated p.R298 0.134 26 0% 78 34.6% 44 70.4% - - - HMMPfam_MMR_HSR1,superfamily_SSF52540 PCNT 5116 genome.wustl.edu 37 21 47852010 47852010 + Missense_Mutation SNP T T A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_006031.5 +1 reviewed p.S2878T 0.010 12 0% 66 22.7% 20 55% benign(0.003) tolerated(0.57) neutral(0.006) NULL PRMT2 3275 genome.wustl.edu 37 21 48064353 48064353 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001535.2 +1 validated p.E94K 0.999 109 0% 210 30% 101 42.5% benign(0.156) tolerated(0.06) neutral(0.337) superfamily_SH3-domain CLTCL1 8218 genome.wustl.edu 37 22 19175545 19175547 + In_Frame_Del DEL TTG TTG - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 TTG TTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_007098.3 -1 reviewed p.N1460in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat GAS2L1 10634 genome.wustl.edu 37 22 29708151 29708151 + Missense_Mutation SNP A A G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000333679 +1 known p.S570G 0.982 25 0% 63 17.5% 30 40% benign(0.135) deleterious(0.02) neutral(0.395) NULL SEC14L4 284904 genome.wustl.edu 37 22 30887873 30887873 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_174977.3 -1 reviewed p.G287C 0.999 17 0% 66 25.8% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_Supernatant protein factor (SPF) C-terminal domain FBLN1 2192 genome.wustl.edu 37 22 45958823 45958823 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001996.2 +1 reviewed p.R577W 0.996 57 0% 154 20.8% 630 36.5% possibly_damaging(0.871) tolerated(0.07) deleterious(0.657) superfamily_EGF/Laminin ENSG00000210082 0 genome.wustl.edu 37 MT 2028 2028 + RNA SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000387347 +1 known NULL NULL 36 0% 46 21.7% 5527 27.8% - - - - ENSG00000198888 0 genome.wustl.edu 37 MT 4118 4118 + Missense_Mutation SNP T T C novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000361390 +1 known p.L271S NULL 63 0% 73 28.8% 8007 26.3% probably_damaging(0.979) deleterious(0) deleterious(0.867) HMMPfam_NADHdh CRLF2 64109 genome.wustl.edu 37 X 1331521 1331521 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000381567 -1 known p.R3W 0.003 33 0% 41 26.8% 0 - probably_damaging(0.999) - - NULL ARSH 347527 genome.wustl.edu 37 X 2951222 2951222 + Silent SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001011719.1 +1 validated p.L495 0.013 108 0% 265 27.2% 4 75% - - - superfamily_Alkaline_phosphatase_core FRMPD4 9758 genome.wustl.edu 37 X 12734980 12734980 + Missense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014728.3 +1 reviewed p.R801H 1.000 348 0% 656 26.4% 0 - benign(0) tolerated(0.67) neutral(0.003) NULL CA5B 11238 genome.wustl.edu 37 X 15768189 15768189 + Missense_Mutation SNP C C G novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_007220.3 +1 reviewed p.P15A 0.014 245 0% 479 24.8% 3 0% benign(0.011) tolerated(0.27) neutral(0.034) NULL TXLNG 55787 genome.wustl.edu 37 X 16850849 16850850 + Frame_Shift_Del DEL AG AG - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 AG AG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_018360.2 +1 reviewed p.R326fs 1.000:1.000 - - - - - - - - - HMMPfam_Taxilin GATA1 2623 genome.wustl.edu 37 X 48650526 48650526 + Missense_Mutation SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_002049.3 +1 reviewed p.P166T 0.644 283 0% 752 25.5% 0 - benign(0) tolerated(0.11) neutral(0.272) NULL KCND1 3750 genome.wustl.edu 37 X 48826586 48826586 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_004979.4 -1 reviewed p.P31 0.000 9 0.000 30 0.300 3 0% - - - NULL MAGIX 79917 genome.wustl.edu 37 X 49021530 49021530 + Silent SNP C C A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b ENST00000415364 +1 known p.S139* 0.003 15 0% 26 38.5% 18 100% - - - HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like STARD8 9754 genome.wustl.edu 37 X 67937782 67937782 + Silent SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001142503.2 +1 reviewed p.R342 1.000 7 0.000 22 0.227 6 0% - - - NULL NHSL2 340527 genome.wustl.edu 37 X 71359116 71359116 + Missense_Mutation SNP G G T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001013627.2 +1 provisional p.R207L 0.997 40 0% 109 31.2% 1 0% probably_damaging(0.992) deleterious(0) deleterious(0.892) NULL BRWD3 254065 genome.wustl.edu 37 X 79945465 79945465 + Splice_Site SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_153252.4 -1 reviewed e32+1 1.000 193 0% 262 26% 0 - - - - - GPRASP2 114928 genome.wustl.edu 37 X 101972194 101972196 + In_Frame_Del DEL TGA TGA - novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 TGA TGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001004051.2 +1 reviewed p.D802in_frame_del 0.505:0.737:0.797 - - - - - - - - - HMMPfam_DUF634,superfamily_ARM-type_fold NKAP 79576 genome.wustl.edu 37 X 119059328 119059328 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_024528.3 -1 reviewed p.R368Q 1.000 219 0% 403 22.8% 50 88% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DUF926 ODZ1 10178 genome.wustl.edu 37 X 123518518 123518518 + Missense_Mutation SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_014253.3 -1 reviewed p.S2081N 1.000 260 0% 395 26.3% 0 - possibly_damaging(0.659) tolerated(0.18) neutral(0.289) NULL FAM127C 441518 genome.wustl.edu 37 X 134156430 134156430 + Silent SNP C C T novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_001078173.1 -1 validated p.A20 0.010 98 0% 192 24.5% 28 0% - - - NULL ATP11C 286410 genome.wustl.edu 37 X 138882259 138882259 + Nonsense_Mutation SNP G G A novel TCGA-A5-A0GA-01A-11W-A062-09 TCGA-A5-A0GA-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 09a580fb-19ab-4de6-88d8-8b32e66fdc25 177405e1-2d92-4fae-8d0a-f20fbc65977b NM_173694.4 -1 validated p.R227* 0.930 223 0% 371 25.6% 1 100% - - - superfamily_Calcium ATPase transduction domain A