Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain RERE 473 genome.wustl.edu 37 1 8526011 8526011 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001042681.1 -1 reviewed p.E393K 1.000 70 0% 116 20.7% - - unknown(0) deleterious(0.03) - HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding GALNT2 2590 genome.wustl.edu 37 1 230381875 230381875 + Missense_Mutation SNP G G C novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_004481.3 +1 reviewed p.A266P 1.000 81 0% 170 15.3% - - probably_damaging(0.999) tolerated(0.22) deleterious(0.532) HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases KIF26B 55083 genome.wustl.edu 37 1 245530524 245530524 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_018012.3 +1 provisional p.T285I 0.253 17 0% 21 38.1% - - benign(0.147) deleterious(0.02) neutral(0.396) NULL MYO7B 4648 genome.wustl.edu 37 2 128370146 128370146 + Silent SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001080527.1 +1 provisional p.I1096 0.426 14 0% 20 30% - - - - - HMMPfam_MyTH4,HMMSmart_SM00139 SH3BP4 23677 genome.wustl.edu 37 2 235951433 235951433 + Missense_Mutation SNP C C G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_014521.2 +1 reviewed p.L674V 1.000 71 0% 76 26.3% - - possibly_damaging(0.556) deleterious(0.03) deleterious(0.554) HMMPfam_SH3_2 ATP2B2 491 genome.wustl.edu 37 3 10417232 10417232 + Missense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001001331.2 -1 reviewed p.T433M 0.998 38 0% 55 23.6% - - possibly_damaging(0.861) deleterious(0.01) deleterious(0.739) HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M HTR3E 285242 genome.wustl.edu 37 3 183818358 183818358 + Silent SNP A A G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_182589.2 +1 reviewed p.R66 0.521 250 0% 330 23% - - - - - superfamily_Neur_chan_LBD TMEM207 131920 genome.wustl.edu 37 3 190167526 190167526 + Nonsense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_207316.1 -1 provisional p.Q25* 1.000 134 0% 197 22.8% - - - - - NULL UGT2B17 7367 genome.wustl.edu 37 4 69433715 69433715 + Missense_Mutation SNP T T A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001077.3 -1 reviewed p.E163V 0.938 607 0% 480 22.9% - - possibly_damaging(0.938) deleterious(0) deleterious(0.828) HMMPfam_UDPGT,superfamily_SSF53756 FBXW7 55294 genome.wustl.edu 37 4 153247366 153247366 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_033632.2 -1 reviewed p.R479Q 1.000 158 0% 158 10.8% - - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40 HCN1 348980 genome.wustl.edu 37 5 45262335 45262335 + Silent SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_021072.2 -1 validated p.S787 0.205 59 0% 42 23.8% - - - - - NULL PCDHA9 9752 genome.wustl.edu 37 5 140229751 140229751 + Silent SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_031857.1 +1 reviewed p.D557 0.993 58 0% 59 15.3% - - - - - HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like PCDHB6 56130 genome.wustl.edu 37 5 140531729 140531729 + Nonsense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_018939.2 +1 reviewed p.R631* 0.983 76 0% 71 26.8% - - - - - HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin GRM6 2916 genome.wustl.edu 37 5 178416069 178416069 + Silent SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_000843.3 -1 reviewed p.A407 0.331 15 0% 14 50% - - - - - HMMPfam_ANF_receptor,superfamily_SSF53822 GLP1R 2740 genome.wustl.edu 37 6 39053712 39053712 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_002062.3 +1 validated p.R419C 1.000 151 0% 212 20.8% - - benign(0.035) deleterious(0.02) neutral(0.385) superfamily_Family A G protein-coupled receptor-like TCTE1 202500 genome.wustl.edu 37 6 44253896 44253896 + Missense_Mutation SNP C C A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_182539.3 -1 validated p.E217D 0.751 28 0% 32 18.8% - - benign(0.005) tolerated(0.31) neutral(0.027) superfamily_SSF52047 MICAL1 64780 genome.wustl.edu 37 6 109771579 109771580 + Frame_Shift_Ins INS - - C novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_022765.3 -1 validated p.A372fs 1.000:1.000 - - - - - - - - - superfamily_FAD/NAD(P)-binding domain TIAM2 26230 genome.wustl.edu 37 6 155500212 155500212 + Nonsense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_012454.3 +1 reviewed p.R855* 0.993 145 0% 199 26.1% - - - - - HMMSmart_SM00455 LOC340268 340268 genome.wustl.edu 37 7 9767546 9767546 + RNA SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 XR_041608.1 +1 model NULL 0.996 60 0% 41 24.4% - - - - - - SOX17 64321 genome.wustl.edu 37 8 55372518 55372518 + Missense_Mutation SNP G G T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_022454.3 +1 reviewed p.S403I 1.000 29 0% 30 30% - - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL KCNV1 27012 genome.wustl.edu 37 8 110984939 110984939 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_014379.2 -1 reviewed p.S180N 1.000 139 0% 121 21.5% - - possibly_damaging(0.553) tolerated(0.49) neutral(0.199) NULL AMBRA1 55626 genome.wustl.edu 37 11 46419022 46419022 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_017749.2 -1 validated p.R1202K 0.927 52 0% 60 26.7% - - benign(0) tolerated(0.19) neutral(0.050) NULL PPFIA1 8500 genome.wustl.edu 37 11 70172754 70172754 + Nonsense_Mutation SNP G G T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_003626.2 +1 reviewed p.E254* 0.998 281 0% 556 23.4% - - - - - NULL TMPRSS5 80975 genome.wustl.edu 37 11 113560542 113560542 + Frame_Shift_Del DEL G G - novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_030770.2 -1 reviewed p.P435fs 1.000 - - - - - - - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases KRAS 3845 genome.wustl.edu 37 12 25398284 25398284 + Missense_Mutation SNP C C A rs121913529 byCluster TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_033360.2 -1 reviewed p.G12V 1.000 74 0% 76 31.6% - - benign(0.048) deleterious(0) neutral(0.448) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases BTBD11 121551 genome.wustl.edu 37 12 108010914 108010914 + Missense_Mutation SNP G G A rs147351765 TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001018072.1 +1 validated p.E684K 0.993 83 0% 72 40.3% - - possibly_damaging(0.616) tolerated(0.06) deleterious(0.537) superfamily_Ankyrin repeat TNFRSF19 55504 genome.wustl.edu 37 13 24167530 24167530 + Missense_Mutation SNP T T G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_018647.2 +1 reviewed p.F39C 1.000 190 0% 226 23% - - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like SNORA31 677814 genome.wustl.edu 37 13 45911657 45911657 + RNA SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NR_002967.1 -1 provisional NULL 1.000 98 0% 76 10.5% - - unknown(0) - - - RB1 5925 genome.wustl.edu 37 13 48937085 48937085 + Missense_Mutation SNP A A G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_000321.2 +1 reviewed p.I285V 1.000 195 0% 227 25.1% - - benign(0) tolerated(1) - NULL TFDP1 7027 genome.wustl.edu 37 13 114287475 114287475 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_007111.4 +1 reviewed p.R117W 0.943 38 0% 50 12% - - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_E2F_TDP,superfamily_SSF46785 KIF23 9493 genome.wustl.edu 37 15 69729046 69729046 + Missense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_138555.1 +1 reviewed p.E514K 0.958 70 0% 106 10.4% - - benign(0.056) tolerated(0.22) neutral(0.046) NULL CYP11A1 1583 genome.wustl.edu 37 15 74635353 74635353 + Missense_Mutation SNP T T G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_000781.2 -1 reviewed p.N319H 1.000 140 0% 156 22.4% - - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_p450,superfamily_Cytochrome P450 UNC45B 146862 genome.wustl.edu 37 17 33504530 33504530 + Missense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_173167.2 +1 validated p.R721Q 0.996 3 0.000 15 0.667 - - probably_damaging(0.995) deleterious(0) deleterious(0.902) superfamily_ARM repeat THRA 7067 genome.wustl.edu 37 17 38245662 38245662 + Missense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_199334.2 +1 reviewed p.L396F 1.000 57 0% 87 25.3% - - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain EPX 8288 genome.wustl.edu 37 17 56277670 56277670 + Missense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_000502.4 +1 reviewed p.R541Q 1.000 56 0% 72 31.9% - - possibly_damaging(0.502) deleterious(0.01) deleterious(0.573) HMMPfam_An_peroxidase,superfamily_Peroxidase_super NLRP4 147945 genome.wustl.edu 37 19 56370052 56370052 + Silent SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_134444.4 +1 validated p.A431 0.000 161 0% 147 23.8% - - - - - NULL USP16 10600 genome.wustl.edu 37 21 30419561 30419561 + Missense_Mutation SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001032410.1 +1 reviewed p.E644K 1.000 240 0% 325 22.8% - - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_UCH,superfamily_Cysteine proteinases DIP2A 23181 genome.wustl.edu 37 21 47987375 47987375 + Missense_Mutation SNP A A G novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_015151.3 +1 reviewed p.N1519S 0.995 60 0% 75 20% - - possibly_damaging(0.894) tolerated(0.28) neutral(0.383) superfamily_Acetyl-CoA synthetase-like TRO 7216 genome.wustl.edu 37 X 54950962 54950962 + Nonsense_Mutation SNP C C T novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_001039705.1 +1 reviewed p.R439* 0.018 62 0% 87 11.5% - - - - - NULL GJB1 2705 genome.wustl.edu 37 X 70444034 70444034 + Silent SNP C C A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_000166.5 +1 reviewed p.G159 1.000 67 0% 57 15.8% - - - - - HMMPfam_Connexin_CCC HCFC1 3054 genome.wustl.edu 37 X 153225792 153225792 + Silent SNP G G A novel TCGA-AP-A05P-01A-11W-A062-09 TCGA-AP-A05P-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx c7149eae-09da-4015-9654-8f17242514a4 74c91100-72fa-45fb-9b0a-02db6a18bc21 NM_005334.2 -1 reviewed p.C326 0.999 4 0.000 9 0.444 - - - - - superfamily_Galactose oxidase central domain