Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain RCC2 55920 genome.wustl.edu 37 1 17743015 17743015 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001136204.1 -1 validated p.N329 0.992 91 0% 68 11.8% 37 10.8% - - - superfamily_RCC1/BLIP-II UBR4 23352 genome.wustl.edu 37 1 19524255 19524255 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020765.2 -1 validated p.R268C 0.989 276 0% 253 11.5% 1 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL HP1BP3 50809 genome.wustl.edu 37 1 21091967 21091967 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_016287.3 -1 validated p.L265 0.984 169 0% 151 25.8% 12 25% - - - "HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain" E2F2 1870 genome.wustl.edu 37 1 23848406 23848406 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004091.2 -1 reviewed p.R167 0.974 162 0% 98 29.6% 0 - - - - HMMPfam_E2F_TDP,superfamily_SSF46785 NUDC 10726 genome.wustl.edu 37 1 27272108 27272108 + Missense_Mutation SNP A A T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006600.2 +1 provisional p.Y292F 1.000 149 0% 64 23.4% 251 21.1% possibly_damaging(0.476) tolerated(0.27) neutral(0.191) NULL RPA2 6118 genome.wustl.edu 37 1 28220890 28220890 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002946.3 -1 provisional p.P182S 0.592 155 0% 137 25.5% 26 15.3% benign(0.021) tolerated(0.22) neutral(0.043) HMMPfam_RPA_C ZSCAN20 7579 genome.wustl.edu 37 1 33959027 33959027 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_145238.3 +1 validated p.Y562C 1.000 239 0% 151 48.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL ERI3 79033 genome.wustl.edu 37 1 44687311 44687311 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024066.1 -1 validated p.D311 1.000 134 0% 42 35.7% 108 13.8% - - - HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T ATG4C 84938 genome.wustl.edu 37 1 63282472 63282472 + Silent SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032852.2 +1 reviewed p.L129 1.000 67 0% 84 25% 1 0% - - - HMMPfam_Peptidase_C54 LEPR 3953 genome.wustl.edu 37 1 66036342 66036342 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002303.4 +1 reviewed p.G76D 0.000 248 0% 267 22.5% 0 - benign(0.001) tolerated(0.87) neutral(0.001) NULL PIGK 10026 genome.wustl.edu 37 1 77587982 77587982 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005482.2 -1 reviewed p.P350H 1.000 199 0% 201 16.9% 6 16.6% probably_damaging(0.964) deleterious(0) deleterious(0.851) NULL AK5 26289 genome.wustl.edu 37 1 77876754 77876754 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_174858.1 +1 reviewed p.A327V 1.000 131 0% 164 26.8% 0 - benign(0.03) tolerated(0.11) neutral(0.273) NULL LPHN2 23266 genome.wustl.edu 37 1 82456536 82456536 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_012302.2 +1 reviewed p.L1307I 1.000 156 0% 162 24.1% 1 0% possibly_damaging(0.677) tolerated(0.08) deleterious(0.541) HMMPfam_Latrophilin HIPK1 204851 genome.wustl.edu 37 1 114500904 114500904 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_198268.1 +1 reviewed p.A658T 1.000 80 0% 95 28.4% 3 0% benign(0.017) tolerated(0.3) neutral(0.029) NULL CHD1L 9557 genome.wustl.edu 37 1 146747087 146747087 + Missense_Mutation SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004284.3 +1 validated p.N447K 1.000 149 0% 136 23.5% 8 0% probably_damaging(1) tolerated(0.18) deleterious(0.556) HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases SPRR2E 6704 genome.wustl.edu 37 1 153066223 153066223 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001024209.2 -1 validated p.S2Y 0.902 315 0% 818 19.4% 0 - unknown(0) - - NULL IQGAP3 128239 genome.wustl.edu 37 1 156503614 156503614 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_178229.4 -1 validated p.H1309 0.567 80 0% 49 16.3% 4 0% - - - HMMSmart_RasGAP,superfamily_Rho_GAP DCAF8 50717 genome.wustl.edu 37 1 160209861 160209861 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015726.3 -1 reviewed p.R117C 0.998 89 0% 135 20% 15 6.6% probably_damaging(0.999) tolerated(0.08) deleterious(0.790) superfamily_WD40 repeat-like TOR1AIP1 26092 genome.wustl.edu 37 1 179887336 179887336 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015602.2 +1 validated p.Q572* 0.134 109 0% 184 10.3% 3 0% - - - HMMPfam_LAP1C MR1 3140 genome.wustl.edu 37 1 181019379 181019379 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001531.1 +1 provisional p.L187 0.999 190 0% 118 11% 7 14.2% - - - HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain PRELP 5549 genome.wustl.edu 37 1 203452470 203452470 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002725.3 +1 reviewed p.A53V 0.003 266 0% 238 18.5% 3 0% benign(0) tolerated(0.36) neutral(0.020) superfamily_L domain-like USH2A 7399 genome.wustl.edu 37 1 215953192 215953192 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_206933.2 -1 reviewed p.T3644 1.000 178 0% 227 14.1% 0 - - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III FBXO28 23219 genome.wustl.edu 37 1 224318184 224318184 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015176.2 +1 validated p.R93K 1.000 104 0% 159 27.7% 1 0% benign(0.094) tolerated(0.22) neutral(0.049) HMMPfam_F-box C1orf101 257044 genome.wustl.edu 37 1 244724297 244724297 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001130957.1 +1 validated p.S453P 0.128 442 0% 626 18.4% 1 100% probably_damaging(0.99) deleterious(0.04) deleterious(0.790) NULL RAB1A 5861 genome.wustl.edu 37 2 65315809 65315809 + Frame_Shift_Del DEL G G - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004161.4 -1 reviewed p.G147fs 1.000 - - - - - - - - - HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMSmart_SM00177,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases ALMS1 7840 genome.wustl.edu 37 2 73799425 73799425 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015120.4 +1 reviewed p.R3473H 1.000 358 0% 306 23.9% 1 100% benign(0) tolerated(1) - NULL SEMA4F 10505 genome.wustl.edu 37 2 74902733 74902733 + Missense_Mutation SNP A A C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004263.3 +1 provisional p.Q485P 1.000 175 0% 107 25.2% 5 0% probably_damaging(0.99) deleterious(0.01) deleterious(0.847) HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain VWA3B 200403 genome.wustl.edu 37 2 98846631 98846631 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_144992.4 +1 provisional p.S757P 0.000 236 0% 251 37.1% 0 - benign(0.006) deleterious(0.03) neutral(0.364) NULL LIMS2 55679 genome.wustl.edu 37 2 128396942 128396942 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017980.4 -1 validated p.L338 0.995 177 0% 76 19.7% 62 9.6% - - - NULL IMP4 92856 genome.wustl.edu 37 2 131103419 131103419 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033416.1 +1 provisional p.M169I 1.000 75 0% 51 15.7% 105 9.5% benign(0.429) deleterious(0.02) deleterious(0.522) HMMPfam_Brix R3HDM1 23518 genome.wustl.edu 37 2 136409417 136409417 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015361.2 +1 provisional p.Q580* 1.000 394 0% 437 21.5% 9 11.1% - - - NULL DHRS9 10170 genome.wustl.edu 37 2 169938248 169938248 + Nonsense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001142270.1 +1 validated p.G53* 1.000 242 0% 218 24.3% 0 - - - - HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains TTN 7273 genome.wustl.edu 37 2 179439742 179439742 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000356127 -1 known p.L21136S 0.942 50 0% 40 15% 1 0% probably_damaging(0.993) - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179598160 179598160 + Missense_Mutation SNP G G A rs148551876 by1000genomes TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000356127 -1 known p.T4043M 1.000 324 0% 340 11.8% 0 - unknown(0) - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179639058 179639058 + Silent SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_133379.3 -1 reviewed p.K2311 0.994 311 0% 308 39.3% 0 - - - - HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 HECW2 57520 genome.wustl.edu 37 2 197183486 197183486 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020760.1 -1 provisional p.V710I 0.990 72 0% 64 23.4% 0 - possibly_damaging(0.882) tolerated(0.15) deleterious(0.585) NULL PARD3B 117583 genome.wustl.edu 37 2 205990395 205990395 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_152526.4 +1 validated p.T456 1.000 255 0% 246 28.5% 0 - - - - HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ DES 1674 genome.wustl.edu 37 2 220284818 220284818 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001927.3 +1 reviewed p.L194 1.000 136 0% 39 17.9% 0 - - - - superfamily_Prefoldin,HMMPfam_Filament ITM2C 81618 genome.wustl.edu 37 2 231742250 231742250 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_030926.4 +1 validated p.R233W 0.998 59 0% 11 36.4% 170 4.7% probably_damaging(1) deleterious(0) deleterious(0.945) NULL NMUR1 10316 genome.wustl.edu 37 2 232393147 232393147 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006056.4 -1 validated p.P195 1.000 36 0% 16 37.5% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 OTOS 150677 genome.wustl.edu 37 2 241078763 241078763 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_148961.3 -1 validated p.A32T 0.995 83 0% 30 30% 7 28.5% benign(0.002) tolerated(0.47) neutral(0.011) NULL RAF1 5894 genome.wustl.edu 37 3 12641689 12641689 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002880.3 -1 reviewed p.R318W 1.000 167 0% 114 11.4% 8 12.5% probably_damaging(0.998) deleterious(0.04) deleterious(0.823) NULL SATB1 6304 genome.wustl.edu 37 3 18436333 18436333 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001131010.1 -1 validated p.G276E 1.000 73 0% 83 39.8% 1 0% possibly_damaging(0.824) deleterious(0.01) deleterious(0.718) NULL CTNNB1 1499 genome.wustl.edu 37 3 41266097 41266097 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001098209.1 +1 reviewed p.D32Y 1.000 71 0% 98 11.2% 21 23.8% probably_damaging(1) deleterious(0) deleterious(0.945) NULL KIF15 56992 genome.wustl.edu 37 3 44816853 44816853 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000438321 +1 known p.R43* 0.191 146 0% 107 34.6% 1 0% - - - NULL ZDHHC3 51304 genome.wustl.edu 37 3 45000806 45000806 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000419642 -1 known p.T40M 0.983 139 0% 48 25% 11 36.3% - - - NULL ITIH3 3699 genome.wustl.edu 37 3 52840959 52840959 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002217.3 +1 validated p.S700N 0.005 41 0% 21 23.8% 2 0% benign(0) tolerated(0.52) neutral(0.009) HMMPfam_ITI_HC_C PDE12 201626 genome.wustl.edu 37 3 57545330 57545330 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_177966.5 +1 validated p.H477Y 1.000 108 0.9% 106 26.4% 2 0% benign(0.007) tolerated(0.64) neutral(0.003) HMMPfam_Exo_endo_phos,superfamily_DNase I-like PXK 54899 genome.wustl.edu 37 3 58380796 58380796 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017771.3 +1 provisional p.N229 1.000 286 0% 137 21.9% 3 33.3% - - - superfamily_Protein kinase-like (PK-like) ABI3BP 25890 genome.wustl.edu 37 3 100583713 100583713 + Missense_Mutation SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015429.3 -1 validated p.T350S 0.164 58 0% 43 41.9% 0 - benign(0.001) tolerated(0.87) neutral(0.001) NULL DPPA2 151871 genome.wustl.edu 37 3 109027068 109027069 + Frame_Shift_Del DEL CT CT - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_138815.3 -1 validated p.R156fs 0.000:0.000 - - - - - - - - - NULL PLA1A 51365 genome.wustl.edu 37 3 119334906 119334906 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015900.2 +1 validated p.G238R 1.000 106 0% 78 14.1% 29 13.7% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases TF 7018 genome.wustl.edu 37 3 133475720 133475720 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001063.3 +1 reviewed p.C246Y 0.993 297 0% 151 13.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Transferrin,HMMSmart_SM00094,PatternScan_TRANSFERRIN_3,superfamily_Periplasmic binding protein-like II ATR 545 ucsc.edu 37 3 142274739 142274740 + Frame_Shift_Ins INS - T T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001184.3 -1 reviewed p.I774fs 0.000:0.000 - - - - - - - - - superfamily_ARM repeat PLCH1 23007 genome.wustl.edu 37 3 155200694 155200694 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001130960.1 -1 validated p.M1049V 0.000 147 0% 184 15.8% 1 100% benign(0) tolerated(0.82) neutral(0.001) NULL MECOM 2122 genome.wustl.edu 37 3 168812894 168812894 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000494292 -1 known p.L988 1.000 61 0% 79 21.5% 23 13% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers PIK3CA 5290 genome.wustl.edu 37 3 178916938 178916940 + In_Frame_Del DEL GAA GAA - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 GAA GAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006218.2 +1 reviewed p.E110in_frame_del 1.000:1.000:1.000 - - - - - - - - - superfamily_SSF54236 TACC3 10460 genome.wustl.edu 37 4 1737482 1737482 + Missense_Mutation SNP C C G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006342.1 +1 reviewed p.Q557E 1.000 52 0% 21 23.8% 27 3.7% probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL TACC3 10460 genome.wustl.edu 37 4 1742709 1742709 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006342.1 +1 reviewed p.R740H 0.112 28 0% 28 28.6% 32 15.6% possibly_damaging(0.936) tolerated(0.11) deleterious(0.653) HMMPfam_TACC LIMCH1 22998 genome.wustl.edu 37 4 41648508 41648509 + Frame_Shift_Del DEL GA GA - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 GA GA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014988.2 +1 validated p.E425fs 0.997:1.000 - - - - - - - - - NULL ANKRD17 26057 genome.wustl.edu 37 4 74124086 74124086 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032217.3 -1 reviewed p.G100 0.074 70 0% 29 31% 0 - - - - NULL BMP2K 55589 genome.wustl.edu 37 4 79747297 79747297 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_198892.1 +1 reviewed p.E95 1.000 239 0% 298 12.4% 0 - - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase UNC5C 8633 genome.wustl.edu 37 4 96090517 96090517 + Silent SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003728.2 -1 reviewed p.P888 0.001 159 0% 167 27.5% 0 - - - - HMMPfam_Death,HMMSmart_SM00005,superfamily_DEATH domain SEC24B 10427 genome.wustl.edu 37 4 110402918 110402918 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006323.2 +1 reviewed p.E382 1.000 311 0% 272 14% 1 0% - - - NULL PET112 5188 genome.wustl.edu 37 4 152681959 152681959 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004564.2 -1 validated p.G59D 1.000 39 0% 45 17.8% 4 0% probably_damaging(0.992) deleterious(0) deleterious(0.892) NULL PDLIM3 27295 genome.wustl.edu 37 4 186423511 186423511 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014476.3 -1 reviewed p.H344 0.993 168 0% 121 11.6% 1 0% - - - HMMPfam_LIM,HMMSmart_SM00132 HCN1 348980 genome.wustl.edu 37 5 45396782 45396782 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_021072.2 -1 validated p.A348T 1.000 196 0% 207 17.9% 0 - possibly_damaging(0.76) deleterious(0) deleterious(0.726) HMMPfam_Ion_trans,superfamily_SSF81324 GPR98 84059 genome.wustl.edu 37 5 89943455 89943455 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032119.3 +1 reviewed p.V1055I 0.002 348 0% 402 29.1% 0 - benign(0) tolerated(0.32) neutral(0.024) HMMPfam_Calx-beta,HMMSmart_SM00237 DDX46 9879 genome.wustl.edu 37 5 134143608 134143608 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014829.2 +1 reviewed p.R709W 1.000 149 0% 138 24.6% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540 APBB3 10307 genome.wustl.edu 37 5 139942012 139942012 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006051.3 -1 reviewed p.A142T 0.996 246 0% 107 25.2% 14 14.2% benign(0.35) tolerated(0.07) neutral(0.430) HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like PCDHA4 56144 genome.wustl.edu 37 5 140187017 140187017 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018907.2 +1 reviewed p.G82D 1.000 71 0% 115 29.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHA10 56139 genome.wustl.edu 37 5 140236340 140236340 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018901.2 +1 reviewed p.D236G 1.000 113 0% 86 23.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like PCDHGA1 56114 genome.wustl.edu 37 5 140712307 140712307 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018912.2 +1 reviewed p.D686N 0.000 183 0% 122 36.9% 1 0% benign(0.012) tolerated(0.31) neutral(0.028) NULL PCDHGA8 9708 genome.wustl.edu 37 5 140772579 140772579 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032088.1 +1 reviewed p.V67I 1.000 93 0% 74 25.7% 0 - benign(0.094) tolerated(0.33) neutral(0.031) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like DIAPH1 1729 genome.wustl.edu 37 5 140953563 140953564 + In_Frame_Ins INS - - GGA rs5871778 TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005219.4 -1 reviewed p.621in_frame_insP 0.002:0.010 - - - - - - - - - HMMPfam_Drf_FH1 PDGFRB 5159 genome.wustl.edu 37 5 149500570 149500570 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002609.3 -1 reviewed p.V823I 1.000 81 0% 33 18.2% 13 0% benign(0.421) tolerated(0.85) neutral(0.137) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like SLU7 10569 genome.wustl.edu 37 5 159840560 159840560 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006425.4 -1 reviewed p.Q158R 1.000 256 0% 340 26.5% 3 0% benign(0.018) tolerated(0.32) neutral(0.025) NULL DSP 1832 genome.wustl.edu 37 6 7580838 7580838 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004415.2 +1 reviewed p.A1472V 1.000 222 0% 253 20.6% 2 0% possibly_damaging(0.494) tolerated(0.4) neutral(0.180) NULL HIST1H2AE 3012 genome.wustl.edu 37 6 26217360 26217360 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_021052.2 +1 reviewed p.A53V 0.999 109 0% 73 23.3% 18 44.4% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMSmart_SM00414,HMMPfam_Histone,superfamily_Histone-fold MAS1L 116511 genome.wustl.edu 37 6 29455156 29455157 + Frame_Shift_Del DEL AC AC - rs146992654 by1000genomes TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 AC AC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_052967.1 -1 provisional p.V175fs 0.055:0.055 - - - - - - - - - HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like FGD2 221472 genome.wustl.edu 37 6 36976695 36976695 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_173558.3 +1 validated p.R52W 0.004 129 0% 66 21.2% 1 0% benign(0) tolerated(0.19) neutral(0.050) NULL SAYSD1 55776 genome.wustl.edu 37 6 39073268 39073268 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018322.1 -1 predicted p.G164 0.957 295 0% 254 29.1% 56 19.6% - - - HMMPfam_SAYSvFN TREML4 285852 genome.wustl.edu 37 6 41196654 41196654 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_198153.2 +1 validated p.A89V 0.002 182 0% 118 27.1% 0 - probably_damaging(0.954) tolerated(0.82) neutral(0.398) HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin TREM1 54210 genome.wustl.edu 37 6 41250407 41250407 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018643.2 -1 provisional p.T44 0.000 377 0.3% 188 24.5% 0 - - - - HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin USP49 25862 genome.wustl.edu 37 6 41774418 41774418 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018561.3 -1 provisional p.V102F 0.700 77 0% 32 12.5% 1 0% benign(0.403) deleterious(0) deleterious(0.574) NULL RSPH9 221421 genome.wustl.edu 37 6 43612843 43612843 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_152732.3 +1 provisional p.A3V 0.310 27 0% 17 29.4% 0 - possibly_damaging(0.81) tolerated(0.12) deleterious(0.566) NULL PTCHD4 442213 genome.wustl.edu 37 6 47847592 47847592 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001013732.3 -1 validated p.A313S 0.999 38 0% 43 37.2% 0 - possibly_damaging(0.772) tolerated(0.2) neutral(0.336) HMMPfam_Patched,superfamily_SSF82866 FAM83B 222584 genome.wustl.edu 37 6 54805863 54805863 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001010872.1 +1 validated p.K698N 0.876 220 0% 281 25.3% 0 - benign(0.009) tolerated(0.06) neutral(0.323) NULL GPR6 2830 genome.wustl.edu 37 6 110301249 110301249 + Missense_Mutation SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005284.3 +1 validated p.Y312N 1.000 94 0% 62 27.4% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_7tm_1,superfamily_SSF81321 DSE 29940 genome.wustl.edu 37 6 116757663 116757663 + Nonsense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001080976.1 +1 reviewed p.G678* 0.995 199 0% 154 18.8% 2 0% - - - NULL FAM54A 113115 genome.wustl.edu 37 6 136560911 136560911 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001099286.1 -1 validated p.S188P 0.000 179 0% 208 23.1% 1 0% benign(0.004) tolerated(0.43) neutral(0.013) HMMPfam_DUF729 SASH1 23328 genome.wustl.edu 37 6 148840728 148840728 + Missense_Mutation SNP G G T rs147468160 by1000genomes TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015278.3 +1 validated p.R303L 0.120 127 0% 79 24.1% 2 0% probably_damaging(0.991) tolerated(0.44) neutral(0.457) NULL SYNJ2 8871 genome.wustl.edu 37 6 158504613 158504613 + Missense_Mutation SNP G G C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003898.3 +1 reviewed p.L1006F 1.000 241 0% 133 44.4% 0 - probably_damaging(1) tolerated(0.2) deleterious(0.549) HMMPfam_DUF1866 THBS2 7058 genome.wustl.edu 37 6 169634940 169634940 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003247.2 -1 reviewed p.I514V 0.315 30 0% 31 25.8% 0 - benign(0) tolerated(0.93) - HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1 THBS2 7058 genome.wustl.edu 37 6 169648854 169648854 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003247.2 -1 reviewed p.Q89 0.972 56 0% 66 19.7% 0 - - - - HMMSmart_TSPN,superfamily_ConA_like_lec_gl ZDHHC4 55146 genome.wustl.edu 37 7 6624877 6624877 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001134387.1 +1 validated p.V243I 0.000 74 0% 40 10% 94 23.4% benign(0.002) tolerated(0.41) neutral(0.015) NULL NEUROD6 63974 genome.wustl.edu 37 7 31377935 31377935 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_022728.2 -1 provisional p.Y316 0.998 248 0% 148 37.8% 0 - - - - NULL KBTBD2 25948 genome.wustl.edu 37 7 32910135 32910136 + Frame_Shift_Del DEL CT CT - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015483.2 -1 validated p.R231fs 1.000:1.000 - - - - - - - - - HMMPfam_BACK NUDCD3 23386 genome.wustl.edu 37 7 44524778 44524779 + Frame_Shift_Del DEL AC AC - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 AC AC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015332.3 -1 reviewed p.A101fs 0.000:0.000 - - - - - - - - - NULL PION 54103 genome.wustl.edu 37 7 76984549 76984549 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017439.3 -1 validated p.A440V 0.000 151 0% 170 27.6% 3 66.6% benign(0.01) tolerated(0.23) neutral(0.042) NULL GTPBP10 85865 genome.wustl.edu 37 7 90014271 90014271 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033107.2 +1 validated p.P323T 1.000 228 0.4% 225 24.4% 11 18.1% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_P-loop containing nucleoside triphosphate hydrolases SMURF1 57154 genome.wustl.edu 37 7 98633220 98633220 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020429.1 -1 reviewed p.F669 0.971 119 0% 50 10% 9 0% - - - HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain ARPC1A 10552 genome.wustl.edu 37 7 98941951 98941951 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006409.2 +1 reviewed p.T69A 1.000 64 0% 72 20.8% 40 15% probably_damaging(0.991) deleterious(0) deleterious(0.889) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 FBXO24 26261 genome.wustl.edu 37 7 100198231 100198231 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033506.2 +1 reviewed p.Q484 0.014 341 0% 166 22.9% 3 0% - - - NULL GCC1 79571 genome.wustl.edu 37 7 127223058 127223058 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024523.5 -1 reviewed p.A446 0.484 231 0% 124 14.5% 2 0% - - - NULL ADAM7 8756 genome.wustl.edu 37 8 24356785 24356785 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000380789 +1 known p.V627I 0.001 265 0% 318 24.5% 0 - possibly_damaging(0.477) deleterious(0.01) deleterious(0.563) NULL ASH2L 9070 genome.wustl.edu 37 8 37978527 37978527 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004674.3 +1 validated p.R342Q 1.000 302 0.7% 318 23% 12 8.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL WHSC1L1 54904 genome.wustl.edu 37 8 38196100 38196100 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_023034.1 -1 reviewed p.V234A 0.108 215 0% 146 25.3% 3 0% benign(0) tolerated(1) - NULL ASPH 444 genome.wustl.edu 37 8 62563624 62563624 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004318.3 -1 reviewed p.V159I 0.000 173 0% 142 18.3% 6 0% benign(0.156) deleterious(0.03) neutral(0.379) HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452 DNAJC5B 85479 genome.wustl.edu 37 8 66992631 66992631 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033105.4 +1 validated p.G118D 1.000 245 0% 226 35% 2 0% probably_damaging(0.995) deleterious(0) deleterious(0.902) superfamily_DnaJ_N ZFHX4 79776 genome.wustl.edu 37 8 77767102 77767102 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024721.4 +1 validated p.V2604M 1.000 131 0% 114 11.4% 0 - probably_damaging(0.999) - - HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1 ZFHX4 79776 genome.wustl.edu 37 8 77768194 77768194 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024721.4 +1 validated p.G2968R 1.000 149 0.7% 126 17.5% 0 - probably_damaging(0.999) - - HMMSmart_SM00451,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355 SLC7A13 157724 genome.wustl.edu 37 8 87242284 87242284 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_138817.2 -1 validated p.P75T 0.509 184 0% 195 23.6% 0 - probably_damaging(0.996) tolerated(0.27) deleterious(0.495) NULL ODF1 4956 genome.wustl.edu 37 8 103572893 103572893 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024410.3 +1 reviewed p.P178 0.878 86 0% 79 43% 0 - - - - superfamily_HSP20_chap MTBP 27085 genome.wustl.edu 37 8 121473422 121473422 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_022045.3 +1 provisional p.A302T 1.000 194 0% 149 26.2% 0 - possibly_damaging(0.68) tolerated(0.08) deleterious(0.542) NULL TEK 7010 genome.wustl.edu 37 9 27180310 27180310 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000459.3 +1 reviewed p.R325H 1.000 116 0% 95 10.5% 0 - probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_EGF_2 ACO1 48 genome.wustl.edu 37 9 32436332 32436332 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002197.2 +1 reviewed p.R728 1.000 281 0% 199 12.1% 13 7.6% - - - HMMPfam_Aconitase_C,superfamily_Aconitase NTRK2 4915 genome.wustl.edu 37 9 87325682 87325682 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006180.3 +1 reviewed p.A187S 0.891 352 0% 409 23% 0 - benign(0.001) tolerated(0.68) neutral(0.002) HMMSmart_LRRCT,superfamily_SSF52058 FAM75C1 441452 genome.wustl.edu 37 9 90535680 90535680 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001145124.1 +1 validated p.N286 0.001 331 0% 248 24.6% 0 - - - - NULL LPAR1 1902 genome.wustl.edu 37 9 113637820 113637820 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001401.3 -1 reviewed p.L326I 1.000 192 0.5% 186 25.8% 7 14.2% possibly_damaging(0.67) tolerated(0.17) neutral(0.296) superfamily_Family A G protein-coupled receptor-like CDK9 1025 genome.wustl.edu 37 9 130550241 130550241 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001261.3 +1 validated p.R94H 1.000 82 0% 23 43.5% 40 42.5% probably_damaging(0.982) deleterious(0.05) deleterious(0.772) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase ADARB2 105 genome.wustl.edu 37 10 1230837 1230837 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018702.2 -1 reviewed p.H669Q 0.991 43 0% 17 29.4% 0 - benign(0.05) tolerated(0.48) neutral(0.014) HMMPfam_A_deamin,HMMSmart_ADEAMc ASB13 79754 genome.wustl.edu 37 10 5691035 5691035 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024701.3 -1 reviewed p.V139I 0.112 310 0% 178 27% 2 50% benign(0.094) tolerated(0.4) neutral(0.023) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat PFKFB3 5209 genome.wustl.edu 37 10 6261658 6261658 + Splice_Site SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004566.3 +1 validated e7+2 1.000 137 0% 57 28.1% 8 100% - - - - SUV39H2 79723 genome.wustl.edu 37 10 14939410 14939410 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024670.3 +1 provisional p.T188I 1.000 234 0% 190 42.6% 0 - benign(0.014) tolerated(0.42) neutral(0.015) HMMPfam_SET,superfamily_SSF82199 CUBN 8029 genome.wustl.edu 37 10 16918965 16918965 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001081.3 -1 reviewed p.V3013F 0.000 170 0% 202 22.8% 2 0% benign(0.112) deleterious(0.04) neutral(0.358) HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain FAM13C 220965 genome.wustl.edu 37 10 61011272 61011272 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000435852 -1 known p.S582I 0.000 231 0% 259 21.6% 0 - unknown(0) - - NULL RTKN2 219790 genome.wustl.edu 37 10 63999516 63999516 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_145307.2 -1 provisional p.R127C 1.000 99 0% 97 29.9% 4 25% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL SLC29A3 55315 genome.wustl.edu 37 10 73122123 73122123 + Missense_Mutation SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000373189 +1 known p.C396S 1.000 209 0% 105 24.8% 10 20% benign(0.214) deleterious(0) neutral(0.466) HMMPfam_Nucleoside_tran EIF5AL1 143244 genome.wustl.edu 37 10 81272498 81272498 + Silent SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001099692.1 +1 validated p.V31 1.000 216 0% 65 20% 31 0% - - - superfamily_Transl_SH3_like PTEN 5728 genome.wustl.edu 37 10 89653800 89653800 + Missense_Mutation SNP T T G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000371953 +1 known p.I33S 1.000 288 0% 237 18.1% 11 36.3% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II MUC5B 727897 genome.wustl.edu 37 11 1267071 1267071 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002458.1 +1 validated p.P2990 0.000 79 0% 40 27.5% 19 31.5% - - - NULL OR51I2 390064 genome.wustl.edu 37 11 5475124 5475124 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001004754.2 +1 validated p.L136F 0.993 278 0% 302 29.1% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_7tm_1,superfamily_SSF81321 OR56B1 387748 genome.wustl.edu 37 11 5757862 5757862 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001005180.1 +1 provisional p.P39H 0.611 191 0% 268 13.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_SSF81321 OR52E8 390079 genome.wustl.edu 37 11 5878417 5878417 + Silent SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001005168.1 -1 provisional p.L172 0.316 282 0% 396 26% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 MICALCL 84953 genome.wustl.edu 37 11 12315174 12315174 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032867.2 +1 validated p.R66W 0.000 472 0% 265 46.8% 1 0% possibly_damaging(0.772) deleterious(0.01) deleterious(0.693) NULL C11orf41 25758 genome.wustl.edu 37 11 33667423 33667423 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_012194.1 +1 validated p.A1576 0.000 85 0% 80 10% 0 - - - - NULL MADD 8567 genome.wustl.edu 37 11 47317560 47317563 + Frame_Shift_Del DEL TGTC TGTC - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 TGTC TGTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003682.3 +1 reviewed p.S1239fs 1.000:1.000:1.000:1.000 - - - - - - - - - NULL ENSG00000205035 0 genome.wustl.edu 37 11 49805528 49805528 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000357667 +1 known p.R271Q 1.000 112 0% 141 9.9% 0 - - - - HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I RBM4 5936 genome.wustl.edu 37 11 66410998 66410998 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002896.2 +1 validated p.R164W 1.000 98 0% 85 12.9% 54 12.9% - - - HMMPfam_zf-CCHC,HMMSmart_SM00343,superfamily_RNA-binding domain RBD C11orf80 79703 genome.wustl.edu 37 11 66555709 66555709 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024650.3 +1 validated p.T201I 0.028 136 0% 111 11.7% 0 - probably_damaging(0.976) deleterious(0) deleterious(0.863) NULL NUMA1 4926 genome.wustl.edu 37 11 71725245 71725245 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006185.2 -1 validated p.A1102T 0.013 133 0% 51 15.7% 36 11.1% benign(0.003) tolerated(0.33) neutral(0.024) NULL ENSG00000214391 0 genome.wustl.edu 37 11 90017063 90017063 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000318973 +1 known p.G404 0.979 445 0% 488 16.6% 367 0% - - - superfamily_Tub_FtsZ_C JRKL 8690 genome.wustl.edu 37 11 96125267 96125267 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003772.3 +1 reviewed p.T485I 1.000 96 0% 141 10.6% 5 0% probably_damaging(1) tolerated(0.09) deleterious(0.796) NULL PAFAH1B2 5049 genome.wustl.edu 37 11 117031951 117031951 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002572.3 +1 validated p.G88R 1.000 173 0% 156 25% 3 66.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lipase_GDSL,superfamily_SGNH hydrolase SLC37A2 219855 genome.wustl.edu 37 11 124954132 124954132 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_198277.2 +1 validated p.G348S 1.000 67 0% 23 17.4% 2 0% possibly_damaging(0.838) deleterious(0.03) deleterious(0.684) HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter IGSF9B 22997 genome.wustl.edu 37 11 133789766 133789766 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014987.1 -1 validated p.P1285H 0.990 32 0% 13 38.5% 0 - unknown(0) deleterious(0) - NULL B3GAT1 27087 genome.wustl.edu 37 11 134251882 134251882 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018644.3 -1 reviewed p.L319 1.000 130 0% 77 10.4% 2 50% - - - superfamily_SSF53448 NTF3 4908 genome.wustl.edu 37 12 5603685 5603685 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001102654.1 +1 reviewed p.P115L 1.000 102 0% 67 35.8% 0 - possibly_damaging(0.85) deleterious(0) deleterious(0.772) NULL PEX5 5830 genome.wustl.edu 37 12 7360633 7360633 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001131023.1 +1 reviewed p.A395T 1.000 130 0% 70 15.7% 17 11.7% possibly_damaging(0.83) deleterious(0) deleterious(0.760) HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452 SLCO1C1 53919 genome.wustl.edu 37 12 20854375 20854375 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017435.4 +1 reviewed p.D85N 1.000 180 0% 185 41.6% 0 - probably_damaging(1) tolerated(0.43) deleterious(0.513) HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter ST8SIA1 6489 genome.wustl.edu 37 12 22487019 22487019 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003034.3 -1 reviewed p.R50W 1.000 105 0% 68 13.2% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL KRAS 3845 genome.wustl.edu 37 12 25398284 25398284 + Missense_Mutation SNP C C G rs121913529 byCluster TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033360.2 -1 reviewed p.G12A 1.000 108 0% 39 46.2% 0 - possibly_damaging(0.434) deleterious(0.03) deleterious(0.506) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases AMN1 196394 genome.wustl.edu 37 12 31824712 31824713 + RNA INS - - A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NR_004854.1 -1 validated NULL 0.003:0.002 - - - - - - - - - - ATF1 466 genome.wustl.edu 37 12 51189728 51189728 + Missense_Mutation SNP T T G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005171.3 +1 validated p.S44A 1.000 154 0% 111 27% 4 0% possibly_damaging(0.74) tolerated(0.34) neutral(0.294) HMMPfam_pKID NEUROD4 58158 genome.wustl.edu 37 12 55420617 55420617 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_021191.2 +1 validated p.A132T 1.000 411 0.2% 331 29% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic LIN7A 8825 genome.wustl.edu 37 12 81205384 81205384 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004664.2 -1 validated p.Y188H 1.000 123 0% 95 11.6% 3 0% possibly_damaging(0.756) tolerated(0.1) deleterious(0.566) HMMSmart_SM00228,superfamily_PDZ domain-like PRDM4 11108 genome.wustl.edu 37 12 108133180 108133180 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_012406.3 -1 reviewed p.Q691 1.000 140 0% 117 22.2% 7 0% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 TRPV4 59341 genome.wustl.edu 37 12 110252294 110252294 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_021625.4 -1 reviewed p.P103H 1.000 100 0% 52 25% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL NAA25 80018 genome.wustl.edu 37 12 112528532 112528532 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_024953.3 -1 reviewed p.R94Q 1.000 158 0% 99 29.3% 0 - benign(0.006) tolerated(1) - superfamily_TPR-like ZCCHC8 55596 genome.wustl.edu 37 12 122983408 122983408 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017612.2 -1 validated p.L70F 1.000 90 0% 44 13.6% 3 0% probably_damaging(1) tolerated(0.05) deleterious(0.845) NULL HCAR2 338442 genome.wustl.edu 37 12 123186783 123186783 + Missense_Mutation SNP C C A rs148160325 by1000genomes TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_177551.3 -1 validated p.G350C 0.000 188 0% 117 29.1% 1 0% benign(0) tolerated(0.22) neutral(0.042) NULL SACS 26278 genome.wustl.edu 37 13 23909873 23909873 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014363.4 -1 reviewed p.S2714 0.814 170 0% 129 12.4% 0 - - - - superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DOCK9 23348 genome.wustl.edu 37 13 99582472 99582472 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001130049.1 -1 validated p.T96A 0.991 63 0% 50 12% 0 - possibly_damaging(0.657) deleterious(0.01) deleterious(0.637) NULL HOMEZ 57594 genome.wustl.edu 37 14 23744827 23744829 + In_Frame_Del DEL TCC TCC - rs67447855 byCluster TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 TCC TCC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020834.2 -1 validated p.E537in_frame_del 0.112:0.064:0.005 - - - - - - - - - NULL AKAP6 9472 genome.wustl.edu 37 14 33014831 33014831 + Silent SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_004274.4 +1 reviewed p.G324 0.000 210 0% 221 19% 0 - - - - NULL FBXO33 254170 genome.wustl.edu 37 14 39870664 39870664 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_203301.2 -1 validated p.R371Q 1.000 161 0% 241 27% 0 - probably_damaging(0.999) tolerated(0.06) deleterious(0.813) NULL NAA30 122830 genome.wustl.edu 37 14 57858370 57858370 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001011713.2 +1 validated p.T232N 1.000 321 0% 192 16.7% 0 - possibly_damaging(0.903) tolerated(0.08) deleterious(0.658) superfamily_Acyl-CoA N-acyltransferases (Nat) FNTB 2342 genome.wustl.edu 37 14 65499352 65499352 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002028.3 +1 validated p.V210 0.634 120 0% 76 28.9% 8 25% - - - HMMPfam_Prenyltrans,superfamily_Terpenoid cyclases/Protein prenyltransferases COQ6 51004 genome.wustl.edu 37 14 74428567 74428567 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_182476.1 +1 validated p.T446 0.004 437 0% 260 11.5% 60 13.3% - - - superfamily_SSF51905 TMED10 10972 genome.wustl.edu 37 14 75643254 75643254 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006827.5 -1 reviewed p.R10L 0.000 89 0% 79 40.5% 188 45.7% unknown(0) tolerated(0.08) - NULL SERPINA3 12 genome.wustl.edu 37 14 95080991 95080991 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001085.4 +1 reviewed p.K71N 0.986 249 0.4% 126 10.3% 690 6.8% probably_damaging(0.997) tolerated(0.06) deleterious(0.788) HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins IGHV1OR15-9 390531 genome.wustl.edu 37 15 20169942 20169942 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000338912 -1 known p.T110 0.991 613 0% 481 23.7% 0 - - - - HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726 CHRNA7 1139 genome.wustl.edu 37 15 32450664 32450664 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000746.3 +1 reviewed p.Y217C 1.000 356 0% 204 15.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD THBS1 7057 genome.wustl.edu 37 15 39880845 39880845 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003246.2 +1 reviewed p.D530 1.000 84 0% 53 17% 4 50% - - - HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat BMF 90427 genome.wustl.edu 37 15 40398273 40398274 + Frame_Shift_Del DEL CT CT - novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001003940.1 -1 reviewed p.Q5fs 0.998:0.994 - - - - - - - - - NULL MYEF2 50804 genome.wustl.edu 37 15 48451055 48451055 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_016132.3 -1 validated p.R261Q 1.000 290 0% 331 10% 3 33.3% probably_damaging(0.997) tolerated(0.06) deleterious(0.788) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD TLN2 83660 genome.wustl.edu 37 15 63053959 63053959 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015059.2 +1 reviewed p.N1573S 1.000 557 0% 381 15.5% 1 100% benign(0.007) tolerated(0.39) neutral(0.016) NULL SPG21 51324 genome.wustl.edu 37 15 65266978 65266978 + Silent SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001127889.1 -1 reviewed p.S138 1.000 182 0% 146 10.3% 27 11.1% - - - superfamily_SSF53474 CHRNB4 1143 genome.wustl.edu 37 15 78921975 78921975 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000750.3 -1 validated p.Y224 0.575 350 0% 200 30.5% 0 - - - - HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD AKAP13 11214 genome.wustl.edu 37 15 86198870 86198870 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006738.4 +1 reviewed p.V1533M 0.000 132 0% 131 19.1% 1 0% benign(0) tolerated(1) - NULL FES 2242 genome.wustl.edu 37 15 91430453 91430453 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002005.3 +1 reviewed p.R174H 1.000 70 0% 26 30.8% 8 12.5% probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL AXIN1 8312 genome.wustl.edu 37 16 364582 364582 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003502.2 -1 reviewed p.S327F 1.000 27 0% 20 35% 29 24.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MKL2 57496 genome.wustl.edu 37 16 14312792 14312792 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014048.3 +1 validated p.A210 0.201 104 0% 108 28.7% 1 0% - - - NULL DCTN5 84516 genome.wustl.edu 37 16 23669844 23669844 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032486.2 +1 provisional p.D45G 1.000 113 0% 109 25.7% 15 40% benign(0.001) tolerated(0.8) neutral(0.001) HMMPfam_Hexapep,superfamily_Trimeric LpxA-like enzymes ASPHD1 253982 genome.wustl.edu 37 16 29912911 29912911 + Missense_Mutation SNP C C G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_181718.3 +1 validated p.R207G 0.999 59 0% 55 45.5% 10 50% probably_damaging(0.964) tolerated(0.07) deleterious(0.726) NULL AMFR 267 genome.wustl.edu 37 16 56396410 56396410 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000314566 -1 known p.P202L 0.000 79 0% 28 35.7% 77 44.1% unknown(0) - - NULL PKD1L2 114780 genome.wustl.edu 37 16 81211574 81211574 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001076780.1 -1 reviewed p.A759T 0.769 127 0% 46 28.3% 0 - possibly_damaging(0.664) tolerated(0.18) neutral(0.291) NULL NUP88 4927 genome.wustl.edu 37 17 5290925 5290925 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002532.3 -1 reviewed p.R612M 1.000 510 0% 401 22.9% 14 14.2% possibly_damaging(0.89) deleterious(0.03) deleterious(0.714) HMMPfam_Nup88 DNAH2 146754 genome.wustl.edu 37 17 7661890 7661890 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020877.2 +1 validated p.P710Q 1.000 331 0% 197 24.4% 0 - probably_damaging(1) tolerated(0.06) deleterious(0.823) HMMPfam_DHC_N1 CHD3 1107 genome.wustl.edu 37 17 7804674 7804674 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001005271.2 +1 reviewed p.R1137Q 1.000 311 0% 84 9.5% 14 7.1% probably_damaging(1) - - superfamily_P-loop containing nucleoside triphosphate hydrolases ALOX12B 242 genome.wustl.edu 37 17 7976236 7976236 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001139.2 -1 reviewed p.F653 0.966 55 0% 38 44.7% 1 100% - - - HMMPfam_Lipoxygenase,superfamily_Lipoxygenase PHF12 57649 genome.wustl.edu 37 17 27237327 27237327 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001033561.1 -1 validated p.H759R 1.000 94 0% 33 18.2% 19 5.2% benign(0.392) deleterious(0.05) deleterious(0.471) NULL SLFN5 162394 genome.wustl.edu 37 17 33586417 33586417 + Nonsense_Mutation SNP T T A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_144975.3 +1 validated p.C236* 0.135 244 0% 223 10.3% 3 0% - - - HMMPfam_AAA_4 PSMD3 5709 genome.wustl.edu 37 17 38140673 38140673 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002809.2 +1 reviewed p.A116V 1.000 209 0% 101 10.9% 43 13.9% benign(0) tolerated(1) - superfamily_TPR-like KRT40 125115 genome.wustl.edu 37 17 39138606 39138606 + Nonsense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_182497.3 -1 reviewed p.E214* 1.000 336 0.3% 214 29.4% 0 - - - - HMMPfam_Filament AOC3 8639 genome.wustl.edu 37 17 41004380 41004380 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_003734.2 +1 reviewed p.G340 0.903 177 0% 51 25.5% 0 - - - - HMMPfam_Cu_amine_oxid,superfamily_CuNH_oxidase KIF2B 84643 genome.wustl.edu 37 17 51900732 51900732 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_032559.4 +1 validated p.T113M 0.003 181 0% 159 41.5% 0 - possibly_damaging(0.668) tolerated(0.05) deleterious(0.582) NULL STRADA 92335 genome.wustl.edu 37 17 61788129 61788129 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001003787.2 -1 reviewed p.A139V 1.000 100 0% 43 14% 8 0% possibly_damaging(0.458) tolerated(0.58) neutral(0.155) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase ABCA5 23461 genome.wustl.edu 37 17 67256522 67256522 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_018672.3 -1 reviewed p.D1199G 0.002 78 0% 94 21.3% 3 33.3% benign(0) tolerated(0.38) neutral(0.018) NULL TBCD 6904 genome.wustl.edu 37 17 80887019 80887019 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005993.4 +1 reviewed p.Q908 1.000 71 0% 17 23.5% 128 17.1% - - - superfamily_ARM repeat SOGA2 23255 genome.wustl.edu 37 18 8798142 8798142 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_015210.3 +1 predicted p.Q763H 0.012 66 0% 35 31.4% 1 100% possibly_damaging(0.63) tolerated(0.06) deleterious(0.542) NULL GATA6 2627 genome.wustl.edu 37 18 19761478 19761478 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005257.3 +1 validated p.R456H 1.000 177 0% 75 12% 0 - unknown(0) deleterious(0) - HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain) TCEB3C 162699 genome.wustl.edu 37 18 44554841 44554841 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_145653.3 -1 reviewed p.T458M 0.003 711 0% 203 7.9% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL ARID3A 1820 genome.wustl.edu 37 19 971939 971939 + Silent SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_005224.2 +1 reviewed p.G552 0.000 25 0% 17 29.4% 10 10% - - - NULL TICAM1 148022 genome.wustl.edu 37 19 4817187 4817187 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_182919.2 -1 validated p.H401 0.898 38 0% 20 40% 17 17.6% - - - NULL CAMSAP3 57662 genome.wustl.edu 37 19 7682325 7682325 + Splice_Site SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001080429.2 +1 validated e17+1 1.000 71 0% 26 38.5% 19 100% - - - - MAN2B1 4125 genome.wustl.edu 37 19 12775706 12775706 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000528.3 -1 reviewed p.R177H 0.997 42 0% 21 23.8% 19 15.7% possibly_damaging(0.672) deleterious(0.03) deleterious(0.603) HMMPfam_Glyco_hydro_38,superfamily_Glyco_hydro/deAcase_b/a-brl OR7C1 26664 genome.wustl.edu 37 19 14910565 14910565 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_198944.1 -1 validated p.H128Q 0.997 221 0% 258 24.4% 1 0% benign(0.167) deleterious(0.03) neutral(0.380) HMMPfam_7tm_1,superfamily_SSF81321 OR7A5 26659 genome.wustl.edu 37 19 14938239 14938239 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_017506.1 -1 validated p.A272V 0.001 233 0% 278 23% 0 - benign(0.033) tolerated(0.14) neutral(0.251) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like CYP4F2 8529 genome.wustl.edu 37 19 15996791 15996791 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001082.3 -1 reviewed p.R353L 0.979 437 0% 412 13.6% 0 - benign(0.117) deleterious(0.02) neutral(0.393) HMMPfam_p450,superfamily_Cytochrome_P450 RPL18A 6142 genome.wustl.edu 37 19 17972156 17972156 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000980.2 +1 reviewed p.P25T 0.963 71 0% 32 15.6% 1622 15.9% benign(0.011) tolerated(0.12) neutral(0.261) HMMPfam_Ribosomal_L18ae ZNF99 7652 genome.wustl.edu 37 19 22939548 22939548 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001080409.1 -1 provisional p.L875I 0.012 353 0% 462 36.8% 0 - possibly_damaging(0.686) deleterious(0.02) deleterious(0.628) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF536 9745 genome.wustl.edu 37 19 30935555 30935555 + Silent SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014717.1 +1 provisional p.G362 1.000 182 0% 76 25% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 SUPT5H 6829 genome.wustl.edu 37 19 39955497 39955497 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001111020.2 +1 validated p.E228D 1.000 127 0% 51 17.6% 29 17.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Supt5,HMMSmart_SM00738 SUPT5H 6829 genome.wustl.edu 37 19 39964917 39964917 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001111020.2 +1 validated p.Q899* 1.000 229 0% 80 17.5% 127 1.5% - - - NULL EID2B 126272 genome.wustl.edu 37 19 40023166 40023166 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_152361.1 -1 provisional p.Q93* 0.082 72 0% 19 21.1% 2 0% - - - NULL LGALS14 56891 genome.wustl.edu 37 19 40199856 40199856 + Missense_Mutation SNP G G T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_203471.1 +1 reviewed p.R137L 0.000 231 0% 202 25.7% 0 - benign(0.183) tolerated(0.68) neutral(0.019) HMMPfam_Gal-bind_lectin,HMMSmart_GLECT,superfamily_ConA_like_lec_gl CEACAM1 634 genome.wustl.edu 37 19 43031328 43031328 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001712.4 -1 reviewed p.G97S 0.000 492 0% 241 26.1% 10 10% benign(0.002) tolerated(0.07) neutral(0.319) HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin GYS1 2997 genome.wustl.edu 37 19 49490525 49490525 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002103.4 -1 reviewed p.G140R 1.000 41 0% 33 39.4% 4 25% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_Glycogen_syn FCGRT 2217 genome.wustl.edu 37 19 50027783 50027783 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001136019.2 +1 reviewed p.L207 1.000 120 0% 45 15.6% 299 15.3% - - - HMMPfam_C1-set,superfamily_Immunoglobulin SIGLEC10 89790 genome.wustl.edu 37 19 51920389 51920389 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_033130.4 -1 validated p.G123E 0.172 213 0% 138 15.9% 0 - probably_damaging(0.992) deleterious(0.01) deleterious(0.853) HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin ZNF616 90317 genome.wustl.edu 37 19 52619607 52619607 + Missense_Mutation SNP T T C novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_178523.3 -1 validated p.I270M 0.001 179 0% 286 20.6% 0 - possibly_damaging(0.632) deleterious(0.01) deleterious(0.627) HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667 PPP2R1A 5518 genome.wustl.edu 37 19 52715982 52715982 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014225.5 +1 reviewed p.R183W 1.000 114 0.9% 63 36.5% 49 71.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HEAT,superfamily_ARM repeat PPP2R1A 5518 genome.wustl.edu 37 19 52719118 52719118 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014225.5 +1 reviewed p.V298 1.000 99 0% 43 44.2% 89 5.6% - - - HMMPfam_HEAT,superfamily_ARM repeat ZNF611 81856 genome.wustl.edu 37 19 53208439 53208439 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_030972.3 -1 validated p.K623 0.019 815 0.1% 723 24.9% 4 50% - - - HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers SIGLEC1 6614 genome.wustl.edu 37 20 3683945 3683945 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_023068.3 -1 reviewed p.R376Q 0.010 83 0% 42 11.9% 3 0% benign(0.001) tolerated(0.95) - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin NAA20 51126 genome.wustl.edu 37 20 20007509 20007509 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_016100.3 +1 validated p.R84Q 1.000 452 0.4% 381 24.7% 45 8.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Acetyltransf_1,superfamily_Acyl-CoA N-acyltransferases (Nat) BPIFA1 51297 genome.wustl.edu 37 20 31829255 31829255 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_016583.3 +1 reviewed p.P216S 0.320 778 0% 568 21.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_LBP_BPI_CETP,superfamily_Bactericidal permeability-increasing protein BPI SRSF6 6431 genome.wustl.edu 37 20 42089232 42089232 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006275.5 +1 reviewed p.R223H 1.000 148 0% 156 14.1% 130 13.8% unknown(0) tolerated(0.19) - NULL TP53TG5 27296 genome.wustl.edu 37 20 44004010 44004010 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_014477.2 -1 validated p.A146V 0.000 305 0% 159 18.2% 0 - probably_damaging(0.959) deleterious(0) deleterious(0.847) NULL CASS4 57091 genome.wustl.edu 37 20 55012496 55012496 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_020356.3 +1 validated p.R105C 0.000 163 0% 84 10.7% 0 - benign(0) deleterious(0.01) neutral(0.406) NULL GMEB2 26205 genome.wustl.edu 37 20 62236138 62236138 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_012384.3 -1 reviewed p.A63T 0.853 39 0% 29 17.2% 1 0% possibly_damaging(0.896) tolerated(0.1) deleterious(0.640) NULL USP41 373856 genome.wustl.edu 37 22 20717917 20717917 + Silent SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000292729 -1 known p.T305I 0.995 74 0% 38 18.4% 3 0% - - - NULL ADORA2A 135 genome.wustl.edu 37 22 24836838 24836838 + Missense_Mutation SNP A A G novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000675.4 +1 reviewed p.Q207R 1.000 183 0.5% 65 29.2% 3 0% possibly_damaging(0.732) deleterious(0.04) deleterious(0.617) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like MYH9 4627 genome.wustl.edu 37 22 36694974 36694974 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_002473.4 -1 reviewed p.D1031Y 1.000 87 0% 34 44.1% 34 32.3% possibly_damaging(0.893) deleterious(0) deleterious(0.796) superfamily_Prefoldin IFT27 11020 genome.wustl.edu 37 22 37154365 37154365 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_006860.3 -1 reviewed p.A183V 0.002 158 0% 47 25.5% 70 27.1% benign(0.001) tolerated(0.17) neutral(0.059) NULL ENSG00000211459 0 genome.wustl.edu 37 MT 1202 1202 + RNA SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000389680 +1 known NULL NULL 30 0% 24 25% 1024 16.9% - - - - KAL1 3730 genome.wustl.edu 37 X 8502453 8502453 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000216.2 -1 reviewed p.R631* 0.881 49 0% 47 53.2% 0 - - - - HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like BCOR 54880 genome.wustl.edu 37 X 39932117 39932117 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001123385.1 -1 reviewed p.A828T 0.009 111 0% 41 22% 5 0% benign(0.001) deleterious(0.01) neutral(0.406) NULL CFP 5199 genome.wustl.edu 37 X 47485775 47485775 + Missense_Mutation SNP C C A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001145252.1 -1 reviewed p.G362W 0.662 95 0% 26 19.2% 7 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1 SSX4B 548313 genome.wustl.edu 37 X 48269478 48269478 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001034832.2 -1 reviewed p.R75W 0.000 385 0% 313 5.4% 0 - benign(0.041) deleterious(0) neutral(0.447) HMMSmart_KRAB,superfamily_Krueppel-associated_box WAS 7454 genome.wustl.edu 37 X 48542343 48542343 + Missense_Mutation SNP G G A novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000377.2 +1 reviewed p.R34Q 0.559 385 0% 212 17.9% 3 0% benign(0.172) tolerated(0.62) neutral(0.019) superfamily_SSF50729 IQSEC2 23096 genome.wustl.edu 37 X 53284062 53284062 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_001111125.1 -1 validated p.A351T 1.000 44 0% 21 19% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL FAM123B 139285 genome.wustl.edu 37 X 63406010 63406010 + Missense_Mutation SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 ENST00000374869 -1 known p.C801Y 0.100 230 0% 129 20.2% 7 0% unknown(0) - - NULL OCRL 4952 genome.wustl.edu 37 X 128723866 128723866 + Silent SNP C C T novel TCGA-B5-A0K6-01A-11W-A062-09 TCGA-B5-A0K6-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6561bfbc-7b1d-4620-a140-802bb24bbc5c a3af2ff9-83b0-4dbb-83ca-2545f3771e30 NM_000276.3 +1 reviewed p.Y838 1.000 531 0% 320 38.8% 4 0% - - - HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP