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E-GEOD-29343 GSE29343 transcription profiling by array Mus musculus

Neurofibromin (Nf1) is required for skeletal muscle development

·Released May 18, 2011 ·Updated March 27, 2012
8
Samples
8
Assays
1
Array Platforms
1
References
Description

Neurofibromatosis type 1 (NF1) is a multi-system disease caused by mutations in the NF1 gene encoding a Ras-GAP protein, neurofibromin, which negatively regulates Ras signalling. Besides neuroectodermal malformations and tumours, the skeletal system is often affected (e.g. scoliosis and long bone dysplasia), demonstrating the importance of neurofibromin for development and maintenance of the musculoskeletal system. Here we focus on the role of neurofibromin in skeletal muscle development. Nf1 gene inactivation in the early limb bud mesenchyme using Prx1-cre (Nf1Prx1) resulted in muscle dystrophy characterised by fibrosis, reduced number of muscle fibres, and reduced muscle force. To gain insight into the molecular changes of the observed muscle dystrophy and fibrosis and to compare these with other known muscle dystrophies, we performed transcriptional profiling of the entire triceps muscles of threemonth-old wild type (wt) and mutant animals using Affymetrix high-density microrrays. We analyzed triceps muscles from 4 three-month-old wt controls and 4 three-month-old Nf1Prx1 mice using the Affymetrix Mouse Gene 1.0 ST platform. Array data was processed by the Affymetrix Exon Array Computational Tool. RNA isolated from each animal was hybridized to a separate microarray.

References
Neurofibromin (Nf1) is required for skeletal muscle development.
Kossler N, Stricker S, Rödelsperger C, Robinson PN, Kim J, Dietrich C, Osswald M, Kühnisch J, Stevenson DA, Braun T, Mundlos S, Kolanczyk M
PMID: 21478499
Array Platforms
A-AFFY-130
Affymetrix GeneChip Mouse Gene 1.0 ST Array [MoGene-1_0-st-v1](8 items)
Sample Attributes
age
3 months
genotype
Nf1Prx1, wild type
Organism
Mus musculus
tissue
triceps muscle
Experiment Info
Accession
E-GEOD-29343
GEO ID
GSE29343
Type
transcription profiling by array
Organism
Mus musculus
Released
May 18, 2011
Updated
March 27, 2012
Submitter
Jirko Kühnisch、 Mateusz Kolanczyk、 Stefan Mundlos、 Nadine Kossler、 Mateusz Kolanczyk、 Monika Osswald、 David A Stevenson、 Peter N Robinson、 Thomas Braun、 Sigmar Stricker、 Christian Rödelsperger、 Carola Dietrich、 Johnny Kim
Analysis Services
Analysis Services

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