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E-GEOD-35617 GSE35617 transcription profiling by array Homo sapiens

The invasion promoter Slug is a critical cell cycle regulator

·Released Feb. 9, 2012 ·Updated May 2, 2014
2
Samples
1
Assays
1
Array Platforms
Description

Background: The well-characterized function of the transcriptional repressor, Slug, is to promote EMT and tumor invasion/metastasis by down-regulating E-cadherin expression. In this study, we investigated the significance of Slug during the S phase. Method: Slug mRNA expression was isolated from thymidine-arrested CL1-5/AS2neo (control) and CL1-5/AS2neo-Slug-WT stable cells. The Agilent oligonucleotide microarray analysis was performed to identify Slug downstream genes. Results: Overexpression of Slug inhibited lung [3H]-thymidine incorporation and delayed S phase progression. By using Agilent microarray we have identified panel of genes altered by Slug overexpression. Slug can down-regulate target genes about cell cycle networks for DNA replication, DNA replication checkpoint and genomic stability, such as TOP1, ORC4, RFC3, and Rad17. Conclusions: the multifaceted role of Slug in cancer progression by controlling the epithelial-mesenchymal transition and genome stability. Two-condition experiment, Vector vs. Slug overexpression cells. The cDNAs encoding full-length human Slug were amplified and subcloned into lentiviral pLKO_AS2.neo which generated full-length Slug. Vector control or Slug lentivirus were transduced into CL1-5 cells and Gentamycin was used to select stable cells.

Array Platforms
A-GEOD-13607
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)(1 items)
Sample Attributes
cell type
CL1-5/AS2neo (control), CL1-5/AS2neo-Slug-WT stable cells
Organism
Homo sapiens
Experiment Info
Accession
E-GEOD-35617
GEO ID
GSE35617
Type
transcription profiling by array
Organism
Homo sapiens
Released
Feb. 9, 2012
Updated
May 2, 2014
Submitter
Y C Hsu、 T M Hong、 Tse-Ming Hong、 P C Yang、 W L Wang
Analysis Services
Analysis Services

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