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E-GEOD-37094 GSE37094 ChIP-chip by tiling array Schizosaccharomyces pombe

Epigenetically induced paucity of histone H2A.Z stabilizes fission yeast ectopic centromeres

·发布 2013年11月3日 ·更新 2014年6月2日
78
样本数
39
实验数
1
芯片平台
实验描述

In most eukaryotes, the centromere is epigenetically defined by nucleosomes that contain the histone H3 variant centromere protein A (CENP-A). Specific targeting of the CENP-A-loading chaperone to the centromere is vital for stable centromere propagation; however, the existence of ectopic centromeres (neocentromeres) indicates that this chaperone can function in different chromatin environments. The mechanism responsible for accommodating the CENP-A chaperone at novel chromatin regions is poorly understood. Here, we report the identification of transient, immature neocentromeres in Schizosaccharomyces pombe, which show reduced association with the CENP-A chaperone Scm3 attributable to persistence of the histone H2A variant H2A.Z. Following acquisition of adjacent heterochromatin or relocation of the immature neocentromeres to subtelomeric regions, H2A.Z was depleted and Scm3 was replenished, leading to subsequent stabilization of the neocentromeres. These findings provide novel insights into histone variant-mediated epigenetic control of neocentromere establishment. Comparison of chromosomal distributions of centromeric proteins and heterochromatin proteins between the NC survivors and their derivatives.

芯片平台
A-GEOD-7277
LSI Schizosaccharomyces pombe genome tiling array 4x44K_v1.0(39 例)
样本属性
antibody catalog#
None, 11 814 460 001, ab1220
antibody lot#
None, 10744900, 625288
antibody vendor
None, abcam, Roche
cell type
None, Dmsc1, neocentric, wild-type
chip antibody
None, Cnp1, GFP, GFP (Roche, cat. No. 11 814 460 001, lot 10744900), H3me2K9, none, Swi6
genotype
None, Cnp20-GFP, Cnp3-GFP, Mis12-GFP, Mis6-GFP, Pht1-GFP, Scm3-GFP
neocentric cell; h90 leu1 ura4 cen2d
None, :kanR cd163 strain, :kanR cd166 strain
organism
Schizosaccharomyces pombe
provider
None, none
strain or line
None, h- leu1 ura4, h- leu1 ura4 cen1D::kanR cd39, h- leu1 ura4 cen1D::kanR cd60, h- leu1 ura4 cen3D::kanR cd385, h- leu1 ura4 cen3D::kanR cd385-dh2.1, h- leu1 ura4 cen3D::kanR cd385-r1, h- leu1 ura4 cen3D::kanR cd385-vector, h- leu1 ura4 cen3D::kanR cd386-r2, h- leu1 ura4 cen3D::kanR cd389, h- leu1 ura4 cen3D::kanR cd389-dh2.1, h- leu1 ura4 cen3D::kanR cd389-r1, h- leu1 ura4 cen3D::kanR cd389-vector, h- leu1 ura4 Dmsc1::hygR
实验信息
登记号
E-GEOD-37094
GEO 编号
GSE37094
实验类型
ChIP-chip by tiling array
物种
Schizosaccharomyces pombe
发布日期
2013年11月3日
更新日期
2014年6月2日
提交者
Kojiro Ishii、 Yuki Ogiyama、 Kojiro Ishii
分析服务
分析服务

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