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E-GEOD-40212 GSE40212 comparative genomic hybridization by ar… Mus musculus

Transgenic mice overexpressing Neuregulin-1 model neurofibroma-malignant peripheral nerve sheath tumor progression and implicate specific chromosomal copy number variations in tumorigenesis

·Released Dec. 31, 2012 ·Updated June 2, 2014
24
Samples
12
Assays
1
Array Platforms
Description

Patients with neurofibromatosis type 1 (NF1) develop benign plexiform neurofibromas that frequently progress to become malignant peripheral nerve sheath tumors (MPNSTs). A genetically engineered mouse model that accurately models plexiform neurofibroma-MPNST progression would facilitate the identification of somatic mutations driving this process. We have previously reported that transgenic mice overexpressing the growth factor neuregulin-1 in Schwann cells (P0-GGFβ3 mice) develop MPNSTs. To determine whether P0-GGFβ3 mice accurately model neurofibroma-MPNST progression, cohorts of these animals were followed to death and necropsied. 94% of the mice developed multiple neurofibromas, with 70% carrying smaller numbers of MPNSTs; nascent MPNSTs were identified within neurofibromas, suggesting that these sarcomas arise from neurofibromas. Although neurofibromin expression was maintained, P0-GGFβ3 MPNSTs, like human NF1-associated MPNSTs, demonstrated Ras hyperactivation. P0-GGFβ3 MPNSTs also showed abnormalities in the p16INK4A-cyclin D/CDK4-Rb and p19ARF-Mdm-p53 pathways analogous to their human counterparts. Array comparative genomic hybridization (CGH) demonstrated reproducible chromosomal alterations in P0-GGFβ3 MPNST cells (including universal chromosome 11 gains) and focal gains and losses affecting 39 genes previously implicated in neoplasia (e.g., Pten, Tpd52, Myc , Gli1, Xiap, Bbc3/PUMA). Array CGH also identified recurrent focal copy number variations affecting genes not previously linked to neurofibroma or MPNST pathogenesis. We conclude that P0-GGFβ3 mice represent a robust model of neurofibroma-MPNST progression that can be used to identify novel genes driving neurofibroma and MPNST pathogenesis. Array CGH comparison of malignant peripheral nerve sheath tumor (MPNST) cells vs non-neoplastic Schwann cells

Array Platforms
A-GEOD-11288
Agilent-015028 Mouse Genome CGH Microarray 44K G4426B(12 items)
Sample Attributes
cell type
malignant peripheral nerve sheath tumor (MPNST) cells, Non-neoplastic Schwann cells
Organism
Mus musculus
strain background
C57BL/6J, C57BL/6J x SJL/J
strain or line
C57BL/6J
variation
P0-GGFβ3 transgenic, wild-type
Experiment Info
Accession
E-GEOD-40212
GEO ID
GSE40212
Type
comparative genomic hybridization by array
Organism
Mus musculus
Released
Dec. 31, 2012
Updated
June 2, 2014
Submitter
William E Grizzle、 Amy N Turk、 Richard P Huijbregts、 Kevin A Roth、 Steven L Carroll、 Nicole M Brossier、 Steven L Carroll、 Stephanie J Byer、 Syed J Kazmi、 Jenell M Eckert、 Fady M Mikhail
Analysis Services
Analysis Services

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