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E-GEOD-70033 GSE70033, SRP059679 other Schizosaccharomyces pombe

The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe

·Released May 12, 2017 ·Updated May 20, 2017
14
Samples
14
Assays
1
References
Description

To establish if PCNA ubiquitylation affects the DNA replication kinetics of specific loci, we compared rates of DNA replication across the genome between rad18+ and rad18-delta cells using the BrdU-IP sequencing method. We mapped BrdU-incorporation at 300-bp resolution and subsequent informatics analysis was performed to generate datasets of replication kinetics.

References
PCNA ubiquitylation ensures timely completion of unperturbed DNA replication in fission yeast.
Daigaku Y, Etheridge TJ, Nakazawa Y, Nakayama M, Watson AT, Miyabe I, Ogi T, Osborne MA, Carr AM
PMID: 28481910
Sample Attributes
cell type
Rad18-deficient, Rad18-proficient
chip antibody
anti-BrdU antibody (BD biosciences, catalog# 347580), input
genotype
h- smt-0 leu1-32 ade6-704 leu1::[leu1-adh:hENT1] his7+ adh1::hsv-TK cdc25-22, h- smt-0 leu1-32 ade6-704 leu1::[leu1-adh:hENT1] his7+ adh1::hsv-TK cdc25-22 rhp18::KanMX6
organism
Schizosaccharomyces pombe
protocol
cdc25 G2 arrest and release
strain
YDP18, YDP183
time after release
0 min, 160 min, 70 min, 75 min, 80 min, 85 min, 90 min
Experiment Info
Accession
E-GEOD-70033
GEO ID
GSE70033, SRP059679
Type
other
Organism
Schizosaccharomyces pombe
Released
May 12, 2017
Updated
May 20, 2017
Submitter
Yasukazu Daigaku、 Yasukazu Daigaku、 Antony M Carr
Analysis Services
Analysis Services

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