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E-GEOD-74622 GSE74622 transcription profiling by array Homo sapiens

BRG1/SMARCA4 is essential for neuroblastoma cell viability through modulation of cell death and survival pathways

·发布 2016年3月1日 ·更新 2016年3月5日
6
样本数
6
实验数
1
芯片平台
实验描述

Neuroblastoma (NB) is a neoplasm of the sympathetic nervous system, and is the most common solid tumor of infancy. NBs are very heterogeneous, with a clinical course ranging from spontaneous regression to resistance to all current forms of treatment. High-risk patients need intense chemotherapy, and only 30-40% will be cured. Relapsed or metastatic tumors acquire multi-drug resistance, raising the need for alternative treatments. Owing to the diverse mechanisms that are responsible of NB chemoresistance, we aimed to target epigenetic factors that control multiple pathways to bypass therapy resistance. We found that the SWI/SNF-related, matrix-associated, actin- dependent regulator of chromatin, subfamily a, member 4 (SMARCA4/BRG1) was consistently upregulated in advanced stages of NB, with high BRG1 levels being indicative of poor outcome. Loss-of-function experiments in vitro and in vivo showed that BRG1 is essential for the proliferation of NB cells. Furthermore, whole genome transcriptome analysis revealed that BRG1 controls the expression of key elements of oncogenic pathways such as PI3K/AKT and BCL2, which offers a promising new combination therapy for high-risk NB Non-silencing control (NSC) or shBRG1 lentiviral vectors were transduced in the Neuroblastoma cell lines SK-N-BE(2) by triplicate. 48h post-infection, total RNA was extracted

芯片平台
A-GEOD-16686
[HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version](6 例)
样本属性
cell line
SK-N-BE(2)
lentivirus
non-silencing control, shBRG1
organism
Homo sapiens
实验信息
登记号
E-GEOD-74622
GEO 编号
GSE74622
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2016年3月1日
更新日期
2016年3月5日
提交者
Miguel F Segura、 Luz Jubierre
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