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E-MTAB-14821 RNA-seq of total RNA Phaeodactylum tricornutum, Phaeodactylum tricornutum

Gene expression analysis of a Phaeodactylum tricornutum wild-type strain and a knock-out strain for the Nitrate Transporter 1/Peptide Transporter Family gene PtNPF2

·发布 2026年8月28日
12
样本数
14
实验数
1
相关文献
实验描述

We generated a Phaeodactylum tricornutum strain in which the Nitrate Transporter 1/Peptide Transporter Family gene PtNPF2 was knocked out through the proteolistics CRISPR/Cas9 method. This strain was compared with a wild-type under normal pH conditions and after 24 hours from a shift from pH 8 to pH 7. The mutants showed a lag in growth coupled with impaired intracellular pH and photosynthetic performances.

参考文献
NPF2 is involved in intracellular pH regulation and ion balance in the diatom Phaeodactylum tricornutum
Santin, A., Russo, M.T., Croteau, D., Ruggiero, A., Russo Spena, S., Morales de los Rios, L., Corratge-Faillie, C., Brignone, S., Lacombe, B., Sanges, R., Chiurazzi, M., Ribera d'Alcalà, M., Bailleul, B., Falciatore, A., Ferrante, M.I. and Rogato, A.
样本属性
Organism
Phaeodactylum tricornutum
Developmental stage
exponential phase
Disease
normal
Organism part
whole cell
Cell type
diatom
Genotype
Pt1
Replicate
2, 3, 1
Growth condition
pH 8, pH 7
Genetic modification
none, PtNpf2 knock-out
实验信息
登记号
E-MTAB-14821
实验类型
RNA-seq of total RNA
物种
Phaeodactylum tricornutum, Phaeodactylum tricornutum
发布日期
2026年8月28日
提交者
Mariella Ferrante
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