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E-MTAB-7885 ChIP-chip by array Saccharomyces cerevisiae

MRE11-RAD50-NBS1 activates Fanconi Anemia R-loop suppression at transcription-replication conflicts

Submitted Nov. 8, 2016 ·Released Oct. 31, 2019 ·Updated April 16, 2019
7
Samples
7
Assays
1
Array Platforms
1
References
Description

Rad50 is a component of the conserved MRE11-RAD50-NBS1 (MRN) complex, which functions in genome stability and the cell’s ability to deal with stalled DNA replication forks. We identified Rad50 as a factor important for R-loop tolerance and thus mapped DNA:RNA hybrids in Rad50KO cells and compare them to previously reported wild-type and Sgs1KO profiles.

References
MRE11-RAD50-NBS1 promotes Fanconi Anemia R-loop suppression at transcription-replication conflicts
Emily Yun-chia Chang, Shuhe Tsai, Maria J. Aristizabal, James P. Wells, Yan Coulombe, Franciele, Yujia A. Chan, Arun Kumar, Yi Dan Zhu, Alan Ying-Hsu Wang, Louis-Alexandre Fournier, Philip Hieter, Michael S. Kobor, Jean-Yves Masson, Peter C. Stirling
Array Platforms
A-GEOD-6476
Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array [Sc03b_MR_v04](7 items)
Sample Attributes
developmental stage
logarithm growth
genotype
Matalpha_ his3_1 leu2_0 ura3_0, Matalpha_ his3_1 leu2_0 ura3_0 rad50_delta, Matalpha_ his3_1 leu2_0 ura3_0 sgs1_delta
organism
Saccharomyces cerevisiae
organism part
whole organism
Experiment Info
Accession
E-MTAB-7885
Type
ChIP-chip by array
Organism
Saccharomyces cerevisiae
Submitted
Nov. 8, 2016
Released
Oct. 31, 2019
Updated
April 16, 2019
Submitter
Maria J Aristiabal
External Links
ArrayExpress source
Analysis Services
Analysis Services

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