BDP1 (B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB)

symbol:
BDP1
locus group:
protein-coding gene
location:
5q13.2
gene_family:
SANT/Myb domain containing
alias symbol:
TFIIIB150|TFC5|TFIIIB90|KIAA1689|HSA238520|KIAA1241
alias name:
None
entrez id:
55814
ensembl gene id:
ENSG00000145734
ucsc gene id:
uc003kbp.2
refseq accession:
NM_018429
hgnc_id:
HGNC:13652
approved reserved:
2000-09-27
5q13.2

BDP1(B double prime 1,也称为TFIIIB150或BRF2复合物亚基)是RNA聚合酶III(Pol III)转录起始复合物的核心组成部分,属于TFIIIB转录因子家族。该基因家族主要负责调控Pol III介导的小分子RNA(如tRNA、5S rRNA、U6 snRNA等)的转录。BDP1通过与BRF2和TBP(TATA结合蛋白)形成TFIIIB复合物,帮助Pol III准确识别启动子并启动转录。BDP1的生物学功能主要体现在维持转录起始复合物的稳定性及招募Pol III至特定基因位点。其主要作用位点是Pol III依赖型基因的启动子区域,如type 2(如5S rRNA)和type 3(如U6 snRNA)启动子。若BDP1发生功能丧失性突变,可能导致Pol III转录活性下降,影响tRNA和rRNA的合成,进而干扰蛋白质翻译、细胞增殖等基础生命活动。研究表明,BDP1异常与某些癌症(如乳腺癌、肺癌)的发生相关,可能因其调控的ncRNA(非编码RNA)参与肿瘤信号通路。BDP1过表达可能增强Pol III转录,导致核糖体生物合成过度激活,促进细胞异常增殖;而表达降低则可能引发转录缺陷,影响细胞代谢稳态。BDP1所属的TFIIIB家族成员(如BRF1、BRF2)均具有保守的蛋白互作结构域,通过结合TBP和DNA协同调控Pol III转录。专业术语解释:Pol III(RNA聚合酶III)负责转录小分子RNA;TFIIIB(转录因子IIIB)是Pol III的通用转录因子;启动子(promoter)是基因转录起始的DNA序列。目前中文术语"B double prime 1"多直译为BDP1,但需注意其与BRF1/BRF2的功能区分。

ChineseEnglish

The product of this gene is a subunit of the TFIIIB transcription initiation complex, which recruits RNA polymerase III to target promoters in order to initiate transcription. The encoded protein localizes to concentrated aggregates in the nucleus, and is required for transcription from all three types of polymerase III promoters. It is phosphorylated by casein kinase II during mitosis, resulting in its release from chromatin and suppression of polymerase III transcription. [provided by RefSeq, Jul 2008]

Nucleotide sequence of BDP1:[NCBI]
Loading Gene Browser...
Protein Sequence
1MFRRARLSVK PNVRPGVGAR GSTASNPQRG RESPRPPDPA
41TDSASKPAEP TDVPTVDFGG AEPQEKAPRS STEKTGGDND
81 VEESSRSSS TVSQRRKRIS STSSLVKSSV SVPSESHPLS
121TINQEAPQPT ATSTKEKQPC SDRYRIYKAQ KLREMLKEEL
161R KEKKQWKN KYAINESQRP PDRSKMTMRD FIYYLPDNNP
201MTSSLEQEKK TEKPSTPVQT REQEGKSTPN AEDNEMEEET
241DD GPLLVPR VKVAEDGSII LDEESLTVEV LRTKGPCVVE
281ENDPIFERGS TTTYSSFRKN YYSKPWSNKE TDMFFLAISM
321VGT DFSMIG QLFPHRARIE IKNKFKREEK TNGWRIDKAF
361QEKRPFDFDF FAHLLQKVLA EEEKRKQKSV KNHSLKEKKS
401TKPR KNVKV KKVACEGVNN DPDESMSSRI SDTERSQKDA
441QTVEEESLTL SREDAEQVAL EVDLNQKKRR RKKQDGANEL
481GVNNL LENA TVQAGPSKGE KHKNKCQAIR PELKEGECSK
521EQMLSCTQNI DGIVGFASTE KVEKRTDPIL SLSNQQDATS
561VATESS ESS TSDLPSFEVG IRALCEVNNA EGSCIEERNV
601DLKNNSLEID QTENVKPMLR GRFQRPKPNL SRAGKKSVLS
641QGKTESE SK NSHSKTSVEK NHVEKDKMNT LDILRMETTE
681RENPEAETVS VLGEKNCLQE GSQLKALRPV QVRGRLQKPK
721PNAGKAAE R KEILISQEEI GANVEKNENE SCADRDTPQH
761MEDQSRKDFE EEDVILQPEK NDSFQNVQPD EPKVLNECLS
801VQENNKANK LNQVPILRTR FQKPKPNIGR GTGRREISSK
841EEVLEKILVS GEMAAALRET VRLDTSPKEM VPAEINTKEM
881QSDLKETGRR AISPREKIL DVIDDTIEME TGLKAMGREI
921CLREKTPEVI DATEEIDKDL EEAGRREISP QKNGPEEVKP
961LGEVETDLKA T GNESSPRE KTPEVTDATE EIDKNLEETG
1001RRKISPRENG PEEVKPVDEM ETDLNATGRE SSPREKTPEV
1041IDATEEIDLE ET EREVSPQ ENGLEEVKPL GEMETDLKAT
1081GRDSFPRGKT PEVIDAIEEI EIDLEETERE ISPQENGLEE
1121VKPLGEMQTD LKA TGREIS PREKTPEVID ATEEIDKDLE
1161ETGRREISPE ENGPEEVKPV DEMETDLKTT GREGSSREKT
1201REVIDAAEVI ETDL EETER EISPQENGPE EVKPVGKMET
1241DLKEIREEIS QREKVLAEFS AIREKEIDLK ETGKRDIPIM
1281EKVSGKMAVV EEMEA DLKE TGKENFRERG SEEICVTEEK
1321VAELKQTGKT DISPRENELE ETSTSRQTDT HLMQSGSNDF
1361SAVPSLDIQN ISSEVL SMM HTPVEEKRNS EKEVSSHFSH
1401FKISSQTHES DKTEVQGIQS PDVPEQFSDI NLSKSLPQEQ
1441KPLEIKPAPF VRSRFKR PK PNLARAALKR ETTESEKYIY
1481EKKSETKKME TIVMQENNEQ TDTLPSQHDE ASLMISREKD
1521TLGHRNEEAV ILPCTQTE R NLSPSNSCEP KEESQSAPVQ
1561KNDSVVSVGT NNVNTFQQEM KESVIQTARQ VRGRLQRPRP
1601NIRKTGQRQI VDKGEAKGI IKEGRTILPK DETEKKVLTV
1641SNSQIETEIE VPSSAVPEHR MYENQSQVVL VENLHVNKTN
1681ETIRHENKPY VPSSAQMTRR KFQKAKPNL GRAHSKKEEP
1721VLEKVTTDQS KEGKPEDHLL QKGASNTQLL LKEKAELLTS
1761LEVSARKDCV GSKESALAKI D AELEEVGP SRRVGEETVG
1801DNSPSSVVEE QYLNKLTSCP QPLNETSYSK IALDGKTTIS
1841STSEYERNRG ERRSHKKFKP NV TRGRGSK RVRGKTSKKE
1881PRASKAMLVT LRASQEEDDD ADDFESDYEE ESYHLAPEEV
1921NKAPVFVPVG LRSPEPVSAQ IEE TMEELE ITVNVPDVGC
1961IAVVEHELPN TDVTTEEMKQ EENLSVPFEM TTSEHIQDEP
2001GTNDGSTEAA ITLLTMGDLV LQSE ISSEQ GDVGVCIIPH
2041VHSKDKSHIP SSLDNVNHKI VHECQELSSP VITTSPASFE
2081ENKIVLEEQS SREEISLMEK VKENA TPTR NTISKVTSNL
2121RIRSRLAKPK PNLEKTLGTN RLDDYQEVSS LCVTKGAEME
2161TQRETEKNAS KATELENKNL GPVTTA ENK DQSKLACVHG
2201IKGTSISSEV NLTERNENQE ESSQEVHMLS VAPVASSETG
2241PCTLGLDRGL GENSVEEPQI KDSKGDS VL TLPVPEYTPT
2281SIPEVQQENI INPQDLTVNL VANVPQDGED EQAFILTLVE
2321IPANAVEEFT DATAQFMPNP LLPAPILV K SVNTEERGDM
2361SICLPATSVG QDAMGLSISG RDNSKKPPDN LDLVSRKRFQ
2401CRLDKNDHIP PAKKRSLTLR DDCQEYTTE VHSKELTNVF
2441EETGESHKGQ DIFLTSGSTL TTPEPQRQQV EAAFQSRGSR
2481SPDACMDKNV PQLPQDEMIV SDKEERTDAA PKSQQMDSR
2521TSSSKASLSR PGRRPLGFLS LICSKNSLES DEPMQVHSKK
2561RLKPLIPGLR KKLKRSNPFN ESQEKNRESS D LLPSPSVI
2601TTQSENISSS ATQVSCDQPL LKEGYKSAQK RAPQGEATTV
2641SEYFFNDIFI EVDETE
结构预测来自 AlphaFold DB(UniProt: A6H8Y1),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of BDP1:           Showing partial SNPs
rs36092       rs36092       rs36092       rs40153       rs40153       rs40153       rs149114       rs149114       rs149114       rs156753       rs156753       rs156753       rs156754       rs156754       rs156754       rs156755       rs156755      

Tissue expression of BDP1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
GTCCTCTGATCTGCTTCCA
59
AGAAGGGTCTCTGAGTTGC
59
GGAGGAACAAAGTTCCAGAG
58
GAAATTGTATTCCTGGTTGGTG
58
GTACCAATGATGGAAGCACC
59
GAGGAATTATACATACTCCATCACC
59
CTGTGCTGATAGAGATACTCCT
58
GGCTGTAATATGACATCTTCCTC
58
GTCCTCTGATCTGCTTCCA
59
ACAAGAAACCTGAGTTGCTG
59
CCTTCTCAACATGATGAAGCT
58
TATCACAGCCTCCTCATTCC
59
GCTCCTAGGAGCAGTACTG
59
CTTCTCTGTGAAACAGTAGAGG
58
CTGTGCTGATAGAGATACTCCT
59
GGCTGTAATATGACATCTTCCTC
59
GCTCCTAGGAGCAGTACTG
59
TTCTCTGTGAAACAGTAGAGGA
59
CTGTGCTGATAGAGATACTCCT
58
GGCTGTAATATGACATCTTCCT
57
Transcription Factors
Target Gene
Interaction Type
PubMed References
BDP1
MYC
Unknown
BDP1
RB1
Unknown
BDP1
TP53
Unknown

Subcellular localization of BDP1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for BDP1:

GO ID
Protein
Source DB
GO:0000126
A0A0A0MRX7 (UniProtKB)
IEA
GO:0001026
A0A0A0MRX7 (UniProtKB)
IEA
GO:0003677
A0A0A0MRX7 (UniProtKB)
IEA
GO:0006359
A0A0A0MRX7 (UniProtKB)
IEA
GO:0000126
A0A0G2JN16 (UniProtKB)
IEA
GO:0001026
A0A0G2JN16 (UniProtKB)
IEA
GO:0003677
A0A0G2JN16 (UniProtKB)
IEA
GO:0006359
A0A0G2JN16 (UniProtKB)
IEA
GO:0000126
A0A0G2JNU3 (UniProtKB)
IEA
GO:0001026
A0A0G2JNU3 (UniProtKB)
IEA
GO:0003677
A0A0G2JNU3 (UniProtKB)
IEA
GO:0006359
A0A0G2JNU3 (UniProtKB)
IEA
GO:0000126
A6H8Y1 (UniProtKB)
IEA
GO:0001026
A6H8Y1 (UniProtKB)
IEA
GO:0003677
A6H8Y1 (UniProtKB)
IEA
GO:0005654
A6H8Y1 (UniProtKB)
IDA
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005654
A6H8Y1 (UniProtKB)
TAS
GO:0005737
A6H8Y1 (UniProtKB)
IDA
GO:0006351
A6H8Y1 (UniProtKB)
IEA
GO:0006359
A6H8Y1 (UniProtKB)
IEA
GO:0000126
H0YCV8 (UniProtKB)
IEA
GO:0001026
H0YCV8 (UniProtKB)
IEA
GO:0006359
H0YCV8 (UniProtKB)
IEA
GO:0000126
H7C5U4 (UniProtKB)
IEA
GO:0001026
H7C5U4 (UniProtKB)
IEA
GO:0006359
H7C5U4 (UniProtKB)
IEA

microRNAs potentially regulating BDP1:     

String
BioGrid
IntAct
mentha
Reactome
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Tobacco Use Disorder 0.002367032 1 0 GAD
Breast Carcinoma 0.000271442 1 0 BeFree
Hearing Loss, Mixed Conductive-Sensorineural 0.000271442 1 0 BeFree
Malignant neoplasm of breast 0.000271442 1 0 BeFree
Squamous cell carcinoma 0.000271442 1 0 BeFree
ACQ-FRET dual-functional near-infrared fluorescent probes for the bioimaging of nanocarriers.
Liu C, Zhang R, Lu Y, Tai Z, Zhu Q, Chen Z, Wu W Asian J Pharm Sci 2026-04-00
Engineering bidirectional chloroplast promoters for tunable co-expression of multiple genes in microalgae (Chlamydomonas reinhardtii).
Tazon AW, Mérindol N, Fantino E, Bouhadada A, Awwad F, Meddeb-Mouelhi F, Desgagné-Penix I Commun Biol 2026-01-03
BRF1, a subunit of RNA polymerase III transcription factor TFIIIB, is essential for cell growth of Trypanosoma brucei.
Vélez-Ramírez D E, Florencio-Martínez L E, Romero-Meza G, Rojas-Sánchez S, Moreno-Campos R, Arroyo R, Ortega-López J, Manning-Cela R, Martínez-Calvillo S Parasitology IF: 2.5 2016-08-19
A Region of Bdp1 Necessary for Transcription Initiation That Is Located within the RNA Polymerase III Active Site Cleft.
Hu Hui-Lan, Wu Chih-Chien, Lee Jin-Cheng, Chen Hung-Ta Mol Cell Biol IF: 2.8 2015-10-05
BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies.
Borck Guntram, Hög Friederike, Dentici Maria Lisa, Tan Perciliz L, Sowada Nadine, Medeira Ana, Gueneau Lucie, Thiele Holger, Kousi Maria, Lepri Francesca, Wenzeck Larissa, Blumenthal Ian, Radicioni Antonio, Schwarzenberg Tito Livio, Mandriani Barbara, Fischetto Rita, Morris-Rosendahl Deborah J, Altmüller Janine, Reymond Alexandre, Nürnberg Peter, Merla Giuseppe, Dallapiccola Bruno, Katsanis Nicholas, Cramer Patrick, Kubisch Christian Genome Res IF: 6.3 2015-09-21
Consanguinity and hereditary hearing loss in Qatar.
Girotto Giorgia, Mezzavilla Massimo, Abdulhadi Khalid, Vuckovic Dragana, Vozzi Diego, Khalifa Alkowari Moza, Gasparini Paolo, Badii Ramin Hum Hered IF: 1.1 2015-03-30
Comprehensive analysis of the whole transcriptomes from two different pig breeds using RNA-Seq method.
Ropka-Molik Katarzyna, Zukowski Kacper, Eckert Robert, Gurgul Artur, Piórkowska Katarzyna, Oczkowicz Maria Anim Genet IF: 2.2 2015-03-02

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