C1GALT1P2 (C1GALT1 pseudogene 2)

symbol:
C1GALT1P2
locus group:
pseudogene
location:
5q11.2
gene_family:
alias symbol:
None
alias name:
None
entrez id:
100128603
ensembl gene id:
ENSG00000251435
ucsc gene id:
None
refseq accession:
NG_021881
hgnc_id:
HGNC:51615
approved reserved:
2015-03-25
5q11.2

C1GALT1P2是一个假基因,属于C1GALT1基因家族。假基因通常是由功能基因复制或逆转录转座产生的非功能性DNA序列,由于积累突变而失去编码蛋白质的能力。C1GALT1基因家族的核心成员是C1GALT1(核心1 β1,3-半乳糖基转移酶1),它编码的酶参与蛋白质糖基化过程,特别是在O-糖基化中起关键作用,影响细胞表面糖蛋白的结构和功能。C1GALT1P2作为假基因,虽然与C1GALT1有相似的序列,但不具备编码功能蛋白的能力。假基因的存在可能通过调控机制影响其同源功能基因的表达,例如作为竞争性内源RNA(ceRNA)吸附microRNA从而间接调控相关基因的表达水平。目前关于C1GALT1P2的具体生物学功能研究较少,但假基因通常被认为可能在基因表达调控、基因组进化中发挥作用。C1GALT1P2的突变或表达变化对机体的直接影响尚不明确,但考虑到它与C1GALT1的关联,可能间接影响糖基化过程。C1GALT1的功能异常与多种疾病相关,包括Tn综合征、某些癌症和免疫疾病,但C1GALT1P2与这些疾病的直接关联尚未证实。由于假基因通常不编码蛋白质,其过表达或降低表达对机体的直接影响可能有限,但可能通过调控网络影响其他基因的表达或功能。C1GALT1基因家族的共性在于它们参与糖基化修饰,影响细胞间识别、信号传导等重要生物学过程。

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Nucleotide sequence of C1GALT1P2:[NCBI]
Loading Gene Browser...
SNP variants of C1GALT1P2:           Showing partial SNPs

Tissue expression of C1GALT1P2:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CTTCATAATGATCCTCATGCGA
59
GTCCTCCTAGATGATTCTGTCC
60
CTTCATAATGATCCTCATGCGA
59
GTCCTCCTAGATGATTCTGTC
57
AAATAAAGACTTCCGTGCTGTG
60
CCAGTATAGCTCATCTCTGCC
60
      No data available

Subcellular localization of C1GALT1P2 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for C1GALT1P2:

microRNAs potentially regulating C1GALT1P2:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

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