C1GALT1P3 (C1GALT1 pseudogene 3)

symbol:
C1GALT1P3
locus group:
pseudogene
location:
8q12.3
gene_family:
alias symbol:
None
alias name:
None
entrez id:
106481730
ensembl gene id:
ENSG00000253544
ucsc gene id:
None
refseq accession:
NG_043459
hgnc_id:
HGNC:51616
approved reserved:
2015-03-25
8q12.3

C1GALT1P3是一个假基因,属于C1GALT1基因家族。假基因通常与功能基因序列相似但不具备编码蛋白质的能力,可能是进化过程中功能基因的复制品因突变而失去功能。C1GALT1基因家族主要参与糖基化过程,特别是与O-糖基化相关的功能,其中功能基因C1GALT1编码核心1β1,3-半乳糖基转移酶,该酶在粘蛋白型O-糖基化中起关键作用,影响细胞表面糖蛋白的结构和功能。C1GALT1P3作为假基因,目前尚未发现其具有明确的生物学功能或表达产物,但假基因有时可能通过调控功能基因的表达或作为竞争性内源RNA(ceRNA)影响相关通路。由于C1GALT1P3是假基因,其突变通常不会对机体产生直接影响,但假基因的变异可能通过影响功能基因的调控网络间接发挥作用。C1GALT1功能基因的异常表达或突变与多种疾病相关,如Tn综合征、某些癌症和免疫疾病,但C1GALT1P3与疾病的直接关联尚未明确。如果C1GALT1P3过表达或降低表达,可能通过竞争性结合microRNA或其他调控因子间接影响C1GALT1或其他相关基因的表达,进而干扰糖基化过程或细胞信号传导,但目前相关研究较少。C1GALT1基因家族的共性在于它们大多参与糖基转移酶活性或糖基化修饰,影响细胞粘附、免疫应答和肿瘤发生等过程。由于假基因的功能研究较为有限,C1GALT1P3的具体作用和机制仍需进一步探索。

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Nucleotide sequence of C1GALT1P3:[NCBI]
Loading Gene Browser...
SNP variants of C1GALT1P3:           Showing partial SNPs

Tissue expression of C1GALT1P3:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CATTGGACAACTTGAAATGGC
58
CCAAAGTAAGTGGATTCATCAG
57
TCTGAATACATGGCACTGGG
59
TGGAATCCTCTGGTTCCAC
59
CACATTGGACAACTTGAAATGG
58
AAAGTAAGTGGATTCATCAGGG
58
      No data available

Subcellular localization of C1GALT1P3 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for C1GALT1P3:

microRNAs potentially regulating C1GALT1P3:     

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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

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