GALNT9-AS1 (GALNT9 antisense RNA 1)

Gene Basic Information

Gene Basic Information

symbol:
GALNT9-AS1
locus group:
non-coding RNA
location:
12q24.33
gene_family:
None
alias symbol:
None
alias name:
None
entrez id:
100130238
ensembl gene id:
None
ucsc gene id:
None
refseq accession:
NR_024563
hgnc_id:
HGNC:56353
approved reserved:
2022-10-07

Chromosome Location

Chromosome Location

12q24.33

Gene Summary

Gene Summary

GALNT9-AS1是一个长链非编码RNA（lncRNA）基因，位于人类染色体12q13.13区域，与GALNT9基因的反义链重叠。作为反义RNA，它可能通过调控邻近的GALNT9基因或其他靶基因的表达来发挥作用。GALNT9属于多肽N-乙酰氨基半乳糖转移酶（GALNT）家族，该家族成员负责在蛋白质的丝氨酸或苏氨酸残基上添加O-连接的糖基化修饰，影响蛋白质的稳定性、定位和功能。GALNT9-AS1可能通过表观遗传调控或转录干扰影响GALNT9的表达，进而影响糖基化过程。目前关于GALNT9-AS1的具体功能研究较少，但lncRNA通常参与细胞增殖、分化、凋亡等过程，并在癌症中可能作为抑癌或促癌因子发挥作用。有研究表明GALNT9-AS1在肝癌中表达下调，可能与肿瘤发生相关，但其机制尚不明确。GALNT9-AS1的过表达或低表达可能通过改变GALNT9的活性影响糖蛋白的修饰，进而干扰细胞信号传导或细胞间相互作用。由于GALNT家族在多种癌症中异常表达，GALNT9-AS1可能通过调控糖基化参与肿瘤进展。该基因的突变或表达异常对机体的影响仍需进一步研究，但可能涉及糖基化相关疾病或肿瘤发生发展。GALNT9-AS1作为GALNT家族相关基因，其功能可能与糖基化调控网络有关，但具体机制和生物学意义需要更多实验验证。

ChineseEnglish

None

OMIM entry for GALNT9-AS1     Wikipedia entry for GALNT9-AS1

Gene Sequence

Gene Sequence

Nucleotide sequence of GALNT9-AS1:[NCBI]
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Gene Variants

Gene Variants

SNP variants of GALNT9-AS1:           Showing partial SNPs

Gene Expression

Gene Expression

Tissue expression of GALNT9-AS1:    [UniProt]

Gene expression across tissues

Gene Primers

Gene Primers

Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score

Transcription Factors

Transcription Factors

      No data available

Gene Ontology

Subcellular localization of GALNT9-AS1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for GALNT9-AS1:

Related microRNA

Related microRNA

microRNAs potentially regulating GALNT9-AS1:     

Gene Interactions

Gene Interactions

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Interacting Gene Interaction Source/Score

Gene Pathways

Gene Pathways

Related Diseases

Related Diseases

Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source

Related Publications

Related Publications

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