ST6GALNAC4 (ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4)

symbol:
ST6GALNAC4
locus group:
protein-coding gene
location:
9q34.11
gene_family:
Sialyltransferases
alias symbol:
ST6GALNACIV|SIAT3C
alias name:
None
entrez id:
27090
ensembl gene id:
ENSG00000136840
ucsc gene id:
uc004bss.3
refseq accession:
NM_175040
hgnc_id:
HGNC:17846
approved reserved:
2001-12-19
9q34.11

ST6GALNAC4(ST6 N-乙酰半乳糖胺α-2,6-唾液酸转移酶4)是一种参与糖基化修饰的酶,属于ST6GALNAC基因家族。该基因家族共有6个成员(ST6GALNAC1-6),它们共同的特点是编码唾液酸转移酶,负责将唾液酸转移到糖蛋白或糖脂的末端N-乙酰半乳糖胺(GalNAc)上,形成α-2,6-唾液酸连接。这种修饰在细胞表面糖复合物的形成中起关键作用,影响细胞间识别、信号传导和免疫应答等过程。ST6GALNAC4主要在神经系统中高表达,其表达产物通过修饰神经细胞粘附分子(如PSA-NCAM)参与神经发育、突触可塑性和神经再生。研究表明,ST6GALNAC4的突变可能导致其酶活性改变,影响神经细胞的迁移和轴突导向,与某些神经系统疾病如精神分裂症和自闭症谱系障碍的发病机制相关。此外,ST6GALNAC4在多种癌症中异常表达,其过表达可能通过改变细胞表面糖基化模式促进肿瘤细胞的转移和侵袭,例如在乳腺癌和结肠癌中ST6GALNAC4的高表达与不良预后相关。相反,降低ST6GALNAC4表达可能抑制肿瘤进展,但同时也可能影响正常的神经功能。ST6GALNAC4还参与调控其他基因的表达或活性,例如通过修饰整合素或生长因子受体影响下游信号通路。该基因的功能复杂性体现在它既参与生理过程如神经发育,又与病理状态如癌症和精神疾病密切相关,这使得它成为糖生物学和疾病研究的重要靶点。

ChineseEnglish

The protein encoded by this gene is a type II membrane protein that catalyzes the transfer of sialic acid from CMP-sialic acid to galactose-containing substrates. The encoded protein prefers glycoproteins rather than glycolipids as substrates and shows restricted substrate specificity, utilizing only the trisaccharide sequence Neu5Ac-alpha-2,3-Gal-beta-1,3-GalNAc. In addition, it is involved in the synthesis of ganglioside GD1A from GM1B. The encoded protein is normally found in the Golgi apparatus but can be proteolytically processed to a soluble form. This protein is a member of glycosyltransferase family 29. Transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Nucleotide sequence of ST6GALNAC4:[NCBI]
Loading Gene Browser...
Protein Sequence
1MKAPGRLVLI ILCSVVFSAV YILLCCWAGL PLCLATCLDH
41HFPTGSRPTV PGPLHFSGYS SVPDGKPLVR EPCRSCAVVS
81 SSGQMLGSG LGAEIDSAEC VFRMNQAPTV GFEADVGQRS
121TLRVVSHTSV PLLLRNYSHY FQKARDTLYM VWGQGRHMDR
161V LGGRTYRT LLQLTRMYPG LQVYTFTERM MAYCDQIFQD
201ETGKNRRQSG SFLSTGWFTM ILALELCEEI VVYGMVSDSY
241CR EKSHPSV PYHYFEKGRL DECQMYLAHE QAPRSAHRFI
281TEKAVFSRWA KKRPIVFAHP SWRTE
结构预测来自 AlphaFold DB(UniProt: Q9H4F1),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of ST6GALNAC4:           Showing partial SNPs
rs13510       rs1043012       rs1043026       rs1062665       rs1127024       rs2274423       rs2296703       rs3780668       rs3818509       rs7026378       rs7468519       rs7856453       rs7875220       rs10739699       rs10739700       rs10760510       rs10760511      

Tissue expression of ST6GALNAC4:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
AAGAACCGACTGGTCATGAG
60
GGATCTTCCACTTGAACCCT
60
TGGTTCACCATGATCCTCG
60
CTCTTCTCCCTGCAGTAGC
60
CTTCTGACCTCCCTACTGC
59
AACAGGGTTGGACTTTGAG
58
GATCTTCCAGGACGAGACG
60
GTAGTGGTAAGGCACTGAGG
60
TGGTTCACCATGATCCTCG
60
CTCTTCTCCCTGCAGTAGC
60
ATAGCAGTGTGCCAGATGG
60
TAGTGTGAATAGTTGCGCAG
58
TGGTTCACCATGATCCTCG
60
CTCTTCTCCCTGCAGTAGC
60
GCTACTGCAGGGAGAAGAG
60
TGCCAGGTACATCTGACAC
59
TATAGCAGTGTGCCAGATGG
60
AGTGTGAATAGTTGCGCAG
59
AAGAACCGACTGGTCATGAG
60
ATCTTCCACTTGAACCCTGG
60
      No data available

Subcellular localization of ST6GALNAC4 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for ST6GALNAC4:

GO ID
Protein
Source DB
GO:0005794
A6NJX0 (UniProtKB)
IEA
GO:0006486
A6NJX0 (UniProtKB)
IEA
GO:0008373
A6NJX0 (UniProtKB)
IEA
GO:0016021
A6NJX0 (UniProtKB)
IEA
GO:0097503
A6NJX0 (UniProtKB)
IEA
GO:0000139
Q9H4F1 (UniProtKB)
TAS
GO:0000139
Q9H4F1 (UniProtKB)
TAS
GO:0001574
Q9H4F1 (UniProtKB)
IBA
GO:0001665
Q9H4F1 (UniProtKB)
IBA
GO:0001665
Q9H4F1 (UniProtKB)
TAS
GO:0006664
Q9H4F1 (UniProtKB)
TAS
GO:0008373
Q9H4F1 (UniProtKB)
TAS
GO:0009311
Q9H4F1 (UniProtKB)
IBA
GO:0016021
Q9H4F1 (UniProtKB)
IEA
GO:0016266
Q9H4F1 (UniProtKB)
TAS
GO:0018279
Q9H4F1 (UniProtKB)
IBA
GO:0047290
Q9H4F1 (UniProtKB)
TAS
GO:0097503
Q9H4F1 (UniProtKB)
IEA
GO:0097503
Q9H4F1 (UniProtKB)
IEA
GO:0097503
Q9H4F1 (UniProtKB)
IEA

microRNAs potentially regulating ST6GALNAC4:     

String
BioGrid
IntAct
mentha
Reactome
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Guillain-Barre Syndrome 0.00272435 1 0 LHGDN
Neoplasm Metastasis 0.000271442 1 0 BeFree
miR-4299 mediates the invasive properties and tumorigenicity of human follicular thyroid carcinoma by targeting ST6GALNAC4.
Miao Xiaolong, Jia Li, Zhou Huimin, Song Xiaobo, Zhou Ming, Xu Jinchao, Zhao Lifen, Feng Xiaobin, Zhao Yongfu IUBMB Life IF: 3.2 2016-10-24
Expression of leukocyte adhesion-related glycosyltransferase genes in acute coronary syndrome patients.
Hadžibegović Irzal, Vrselja Zvonimir, Lauc Gordan, Curić Goran Inflamm Res IF: 6.2 2015-03-13
Aberrant glycosylation promotes lung cancer metastasis through adhesion to galectins in the metastatic niche.
Reticker-Flynn Nathan E, Bhatia Sangeeta N Cancer Discov IF: 29.5 2015-10-22

Loading comments...

Log in to post comments Log In Sign Up

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com