TAF5 (TATA-box binding protein associated factor 5)

symbol
TAF5
locus group
protein-coding gene
location
10q24.33
gene_family
WD repeat domain containing
alias symbol
TAFII100
alias name
None
entrez id
6877
ensembl gene id
ENSG00000148835
ucsc gene id
uc001kwv.5
refseq accession
NM_006951
hgnc_id
HGNC:11539
approved reserved
1995-07-07
10q24.33
ChineseEnglish

TAF5, or TATA-box binding protein associated factor 5, is a critical subunit of the TATA-binding protein (TBP)-containing factor IID (TFIID) complex, serving as a fundamental component of the general transcription machinery in eukaryotic cells. As a member of the TAF gene family, TAF5 utilizes conserved structural motifs, such as histone-fold domains, to mediate specific protein-protein interactions with TBP and other TAF subunits, thereby stabilizing the assembly of the pre-initiation complex at gene promoters. Beyond its canonical role in recruiting RNA polymerase II to initiate transcription, TAF5 functions as a multifaceted regulatory protein that interfaces with chromatin-modifying enzymes, including histone acetyltransferases, to alter local chromatin architecture and fine-tune gene expression levels. This dual capacity allows TAF5 to exert precise control over transcriptional programs essential for cellular development, differentiation, and homeostasis, particularly within the nucleus where dynamic regulatory networks are established. Disruptions in TAF5 function, whether through loss-of-function mutations or aberrant overexpression, can compromise the integrity of the TFIID complex and trigger cascading effects on the stability of related subunits such as TAF6 and TAF12, ultimately leading to global transcriptional dysregulation. Clinically, such defects are implicated in severe pathologies, including neurodevelopmental disorders and malignancies like leukemia, where the imbalance in the expression of proliferation and differentiation genes disrupts normal cellular physiology. Consequently, TAF5 represents a pivotal node in the regulatory hierarchy of eukaryotic transcription, linking the mechanical assembly of the transcriptional apparatus with the epigenetic landscape and disease susceptibility.

Nucleotide sequence of TAF5:[NCBI]
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Protein Sequence
1MAALAEEQTE VAVKLEPEGP PTLLPPQAGD GAGEGSGGTT
41NNGPNGGGGN VAASSSTGGD GGTPKPTVAV SAAAPAGAAP
81 VPAAAPDAG APHDRQTLLA VLQFLRQSKL REAEEALRRE
121AGLLEEAVAG SGAPGEVDSA GAEVTSALLS RVTASAPGPA
161A PDPPGTGA SGATVVSGSA SGPAAPGKVG SVAVEDQPDV
201SAVLSAYNQQ GDPTMYEEYY SGLKHFIECS LDCHRAELSQ
241LF YPLFVHM YLELVYNQHE NEAKSFFEKF HGDQECYYQD
281DLRVLSSLTK KEHMKGNETM LDFRTSKFVL RISRDSYQLL
321KRH LQEKQN NQIWNIVQEH LYIDIFDGMP RSKQQIDAMV
361GSLAGEAKRE ANKSKVFFGL LKEPEIEVPL DDEDEEGENE
401EGKP KKKKP KKDSIGSKSK KQDPNAPPQN RIPLPELKDS
441DKLDKIMNMK ETTKRVRLGP DCLPSICFYT FLNAYQGLTA
481VDVTD DSSL IAGGFADSTV RVWSVTPKKL RSVKQASDLS
521LIDKESDDVL ERIMDEKTAS ELKILYGHSG PVYGASFSPD
561RNYLLS SSE DGTVRLWSLQ TFTCLVGYKG HNYPVWDTQF
601SPYGYYFVSG GHDRVARLWA TDHYQPLRIF AGHLADVNCT
641RFHPNSN YV ATGSADRTVR LWDVLNGNCV RIFTGHKGPI
681HSLTFSPNGR FLATGATDGR VLLWDIGHGL MVGELKGHTD
721TVCSLRFS R DGEILASGSM DNTVRLWDAI KAFEDLETDD
761FTTATGHINL PENSQELLLG TYMTKSTPVV HLHFTRRNLV
801LAAGAYSPQ
Structure predicted by AlphaFold DB(UniProt: Q15542). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of TAF5:           Showing partial SNPs
rs954347       rs1052183       rs1052184       rs2176448       rs4918008       rs4918010       rs4918011       rs4918012       rs7069667       rs7071418       rs7099480       rs7893168       rs7894768       rs7905968       rs7913980       rs10883856       rs10883857      

Tissue expression of TAF5:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CTTACCAGGGTCTCACTGC
60
ACTCTGACAGTTGAATCTGCA
60
CCGGGTAAAGTTGGAAGTG
59
GATCTCCTTGTTGGTTGTAGG
59
TGTGCACATGTACTTGGAG
58
CTGATCTCCATGGAACTTCTC
58
Transcription Factors
Target Gene
Interaction Type
PubMed References
TAF5
CDKN1A
Unknown

Subcellular localization of TAF5 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for TAF5:

GO ID
Protein
Source DB
GO:0003700
Q15542 (UniProtKB)
IMP
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005515
Q15542 (UniProtKB)
IPI
GO:0005634
Q15542 (UniProtKB)
IDA
GO:0005634
Q15542 (UniProtKB)
IDA
GO:0005654
Q15542 (UniProtKB)
IDA
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005654
Q15542 (UniProtKB)
TAS
GO:0005669
Q15542 (UniProtKB)
IDA
GO:0005669
Q15542 (UniProtKB)
IDA
GO:0006352
Q15542 (UniProtKB)
IDA
GO:0006355
Q15542 (UniProtKB)
IEA
GO:0006366
Q15542 (UniProtKB)
TAS
GO:0006367
Q15542 (UniProtKB)
IDA
GO:0006367
Q15542 (UniProtKB)
IDA
GO:0006367
Q15542 (UniProtKB)
TAS
GO:0006367
Q15542 (UniProtKB)
TAS
GO:0006368
Q15542 (UniProtKB)
TAS
GO:0015629
Q15542 (UniProtKB)
IDA
GO:0016032
Q15542 (UniProtKB)
IEA
GO:0016568
Q15542 (UniProtKB)
IC
GO:0016573
Q15542 (UniProtKB)
IEA
GO:0033276
Q15542 (UniProtKB)
IDA
GO:0033276
Q15542 (UniProtKB)
IDA
GO:0042795
Q15542 (UniProtKB)
TAS
GO:0043231
Q15542 (UniProtKB)
IDA
GO:0044212
Q15542 (UniProtKB)
IDA
GO:0046983
Q15542 (UniProtKB)
IDA
GO:1901796
Q15542 (UniProtKB)
TAS
GO:0005730
Q15542 (UniProtKB)
IDA
GO:0003700
Q15542 (UniProtKB)
IDA
GO:0004402
Q15542 (UniProtKB)
IDA

microRNAs potentially regulating TAF5:     

String
BioGrid
IntAct
mentha
MINT
Reactome
Loading…
Interacting Gene Interaction Source/Score
Research on the diagnosis model of osteoarthritis based on methylation-related genes using machine learning algorithms.
Cui X, Ji H, Guo S, Liu J, Zhang L, Jia Y, Cui Y, Zhou X Front Genet IF: 2.8 2025-00-00
Complex-Mediated Synthesis of Tantalum Oxyfluoride Hierarchical Nanostructures for Highly Efficient Photocatalytic Hydrogen Evolution.
Xu Leilei, Gong Haotian, Deng Li, Long Fei, Gu Yu, Guan Jianguo ACS Appl Mater Interfaces IF: 7.8 2016-08-23
Identification of suitable reference genes for gene expression studies by qRT-PCR in the blister beetle Mylabris cichorii.
Wang Yu, Wang Zhong-Kang, Huang Yi, Liao Yu-Feng, Yin You-Ping J Insect Sci IF: 0.843 2015-07-08
The architecture of human general transcription factor TFIID core complex.
Bieniossek Christoph, Papai Gabor, Schaffitzel Christiane, Garzoni Frederic, Chaillet Maxime, Scheer Elisabeth, Papadopoulos Petros, Tora Laszlo, Schultz Patrick, Berger Imre Nature IF: 56.1 2013-02-13
High levels of γ-glutamyl hydrolase (GGH) are associated with poor prognosis and unfavorable clinical outcomes in invasive breast cancer.
Shubbar Emman, Helou Khalil, Kovács Anikó, Nemes Szilárd, Hajizadeh Shahin, Enerbäck Charlotta, Einbeigi Zakaria BMC Cancer IF: 3.288 2013-06-14
Network biology of tumor stem-like cells identified a regulatory role of CBX5 in lung cancer.
Yu Yau-Hua, Chiou Guang-Yuh, Huang Pin-I, Lo Wen-Liang, Wang Chien-Ying, Lu Kai-Hsi, Yu Cheng-Chia, Alterovitz Gil, Huang Wen-Chien, Lo Jeng-Fan, Hsu Han-Shui, Chiou Shih-Hwa Sci Rep IF: 4.9 2013-03-22
TFIID TAF6-TAF9 complex formation involves the HEAT repeat-containing C-terminal domain of TAF6 and is modulated by TAF5 protein.
Scheer Elisabeth, Delbac Frédéric, Tora Laszlo, Moras Dino, Romier Christophe J Biol Chem IF: 4.1 2012-11-05

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