TCERG1 (transcription elongation regulator 1)

symbol:
TCERG1
locus group:
protein-coding gene
location:
5q32
gene_family:
alias symbol:
CA150|Urn1
alias name:
transcription factor CA150|co-acti…
entrez id:
10915
ensembl gene id:
ENSG00000113649
ucsc gene id:
uc003lob.4
refseq accession:
NM_001040006
hgnc_id:
HGNC:15630
approved reserved:
2001-06-20
5q32

TCERG1(转录延伸调节因子1,英文全称Transcription Elongation Regulator 1)是一个参与转录延伸调控的基因,其编码的蛋白质在RNA聚合酶II介导的转录延伸过程中发挥重要作用。该蛋白通过与其他转录延伸因子(如DSIF和NELF复合物)相互作用,调节RNA聚合酶II在基因转录中的暂停和释放,从而影响基因表达的效率和准确性。TCERG1的生物学功能主要体现在维持转录过程的动态平衡,确保mRNA合成的正确性和完整性。其主要作用位点是细胞核,特别是在转录活跃的染色质区域。TCERG1的突变可能导致转录延伸异常,进而影响下游基因的表达,可能引发发育缺陷或疾病。研究表明,TCERG1与某些神经退行性疾病(如亨廷顿病)和癌症有关,其异常表达可能通过扰乱转录调控网络促进疾病进展。如果TCERG1过表达,可能增强某些致癌基因的转录,导致细胞增殖失控;而降低表达则可能影响关键基因的正常转录,引发细胞功能障碍。TCERG1属于转录延伸因子相关基因家族,该家族成员通常具有调控RNA聚合酶II活性的功能,并在转录后修饰和mRNA加工中发挥作用。基因家族的共性包括参与转录延伸、暂停和终止的调控,以及与染色质重塑因子的协同作用。目前关于TCERG1的研究仍在深入,其在疾病中的具体机制和潜在治疗靶点值得进一步探索。

ChineseEnglish

This gene encodes a nuclear protein that regulates transcriptional elongation and pre-mRNA splicing. The encoded protein interacts with the hyperphosphorylated C-terminal domain of RNA polymerase II via multiple FF domains, and with the pre-mRNA splicing factor SF1 via a WW domain. Alternative splicing results in multiple transcripts variants encoding different isoforms. [provided by RefSeq, Jul 2008]

Nucleotide sequence of TCERG1:[NCBI]
Loading Gene Browser...
Protein Sequence
1MAERGGDGGE SERFNPGELR MAQQQALRFR GPAPPPNAVM
41RGPPPLMRPP PPFGMMRGPP PPPRPPFGRP PFDPNMPPMP
81 PPGGIPPPM GPPHLQRPPF MPPPMSSMPP PPGMMFPPGM
121PPVTAPGTPA LPPTEEIWVE NKTPDGKVYY YNARTRESAW
161T KPDGVKVI QQSELTPMLA AQAQVQAQAQ AQAQAQAQAQ
201AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ
241AQ AQVQAQV QAQVQAQAVG ASTPTTSSPA PAVSTSTSSS
281TPSSTTSTTT TATSVAQTVS TPTTQDQTPS SAVSVATPTV
321SVS TPAPTA TPVQTVPQPH PQTLPPAVPH SVPQPTTAIP
361AFPPVMVPPF RVPLPGMPIP LPGVAMMQIV SCPYVKTVAT
401TKTG VLPGM APPIVPMIHP QVAIAASPAT LAGATAVSEW
441TEYKTADGKT YYYNNRTLES TWEKPQELKE KEKLEEKIKE
481PIKEP SEEP LPMETEEEDP KEEPIKEIKE EPKEEEMTEE
521EKAAQKAKPV ATAPIPGTPW CVVWTGDERV FFYNPTTRLS
561MWDRPD DLI GRADVDKIIQ EPPHKKGMEE LKKLRHPTPT
601MLSIQKWQFS MSAIKEEQEL MEEINEDEPV KAKKRKRDDN
641KDIDSEK EA AMEAEIKAAR ERAIVPLEAR MKQFKDMLLE
681RGVSAFSTWE KELHKIVFDP RYLLLNPKER KQVFDQYVKT
721RAEEERRE K KNKIMQAKED FKKMMEEAKF NPRATFSEFA
761AKHAKDSRFK AIEKMKDREA LFNEFVAAAR KKEKEDSKTR
801GEKIKSDFF ELLSNHHLDS QSRWSKVKDK VESDPRYKAV
841DSSSMREDLF KQYIEKIAKN LDSEKEKELE RQARIEASLR
881EREREVQKAR SEQTKEIDR EREQHKREEA IQNFKALLSD
921MVRSSDVSWS DTRRTLRKDH RWESGSLLER EEKEKLFNEH
961IEALTKKKRE H FRQLLDET SAITLTSTWK EVKKIIKEDP
1001RCIKFSSSDR KKQREFEEYI RDKYITAKAD FRTLLKETKF
1041ITYRSKKLIQ ES DQHLKDV EKILQNDKRY LVLDCVPEER
1081RKLIVAYVDD LDRRGPPPPP TASEPTRRST K
结构预测来自 AlphaFold DB(UniProt: O14776),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of TCERG1:           Showing partial SNPs
rs962591       rs998051       rs1025478       rs1025479       rs1056894       rs1529692       rs1802027       rs1864968       rs1864969       rs1984741       rs2033469       rs2033471       rs2033472       rs2033474       rs2082402       rs2099319       rs2163770      

Tissue expression of TCERG1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TTGAAGAAACTAAGGCACCC
58
CCACATAAAGGACTTCTTTGAC
57
GAGTTGTTGAGCCTTGCTG
60
AATCATATCAGGTAGAGGGACTG
59
TTTCCACCAGTAATGGTACCT
59
CATTCCTGGCAATACACCTG
59
TGTTATGGGATTCCCTAGTGAG
59
ATCCGATTTAATCGGAACTCG
58
TCATCCACAGAACAGATCCA
59
CCAGTACTAGATACCGTTTGTC
58
CTGACATGGTACGTTCTTCAG
59
ATAAGGATCCAGATTCCCAGC
60
GAAACTAAGGCACCCAACTC
59
TGCACTCATAGAGAATTGCC
58
GAGGTGAGAAGATTAAATCGGA
58
TTACTTTGCTCCATCGAGAC
58
GCAGTAGATAGTTCATCAATGAGAG
59
CCTTTCTCGTTCTCGAAGG
58
AGTATCAACACCCACAACAC
58
GGAGTTGAAACACTAACTGTAGG
59
Transcription Factors
Target Gene
Interaction Type
PubMed References
SF1
TCERG1
Repression

Subcellular localization of TCERG1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for TCERG1:

GO ID
Protein
Source DB
GO:0000122
O14776 (UniProtKB)
IDA
GO:0001103
O14776 (UniProtKB)
IPI
GO:0001106
O14776 (UniProtKB)
IDA
GO:0003713
O14776 (UniProtKB)
TAS
GO:0005515
O14776 (UniProtKB)
IPI
GO:0005515
O14776 (UniProtKB)
IPI
GO:0005515
O14776 (UniProtKB)
IPI
GO:0005634
O14776 (UniProtKB)
IDA
GO:0005730
O14776 (UniProtKB)
IDA
GO:0006366
O14776 (UniProtKB)
TAS
GO:0015629
O14776 (UniProtKB)
IDA
GO:0044822
O14776 (UniProtKB)
IDA
GO:0044822
O14776 (UniProtKB)
IDA
GO:0070064
O14776 (UniProtKB)
IEA

microRNAs potentially regulating TCERG1:     

String
BioGrid
IntAct
mentha
MINT
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Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Huntington Disease 0.00272435 1 0 LHGDN
Celiac Disease 0.002367032 1 0 GAD
Systematic review of the molecular basis for cavernous sinus invasion in somatotropinomas.
Ovenden CD, Candy N, Bacchi S, Sorvina A, Castle-Kirszbaum M, Poonnoose S, Vrodos N, Jukes A, Santoreneos S, Torpy DJ, Psaltis A, De Sousa S Endocr Relat Cancer IF: 4.4 2026-05-01
Huntingtin (HTT) interactome in regulation of DNA repair/remodeling and RNA processing pathways.
Ratovitski T, Holland CD, O'Meally RN, Shevelkin AV, Kamath SV, Shi T, Rodriguez MJ, Cole RN, Jiang M, Ross CA Life Sci Alliance 2026-06-00
Machine learning integrated extracellular vesicle proteome analysis for early markers of bronchopulmonary dysplasia.
Amatya S, Rice S, Stanley A, Chen H, Donnelly A, Stephens H, Siddaiah R, Belani CP, Chroneos ZC Function (Oxf) 2026-04-01
Stress endurance mediates the healthspan-promoting effect of two newly described iridoid glycosides from Verbascum nigrum ssp. abietinum in Caenorhabditis elegans.
Krustanova S, Todorova MN, Gerasimova V, Savova MS, Stoyanov S, Popova MP, Georgiev MI, Alipieva K Phytomedicine IF: 11.3 2026-04-00
Revealing the Antagonistic Interactions of Faecalibacterium prausnitzii and Bacteroides fragilis in Colorectal Cancer.
Kong C, Jin Y, Guo F, Yang Y, Liu G, Chen Z, Li J, Wang Q, Ma Y Gastroenterology IF: 29.7 2026-06-00
LIPL-1 and LIPL-2 are TCER-1-regulated Lysosomal Lipases with Distinct Roles in Immunity and Fertility.
Bahr L, Amrit FR, Silvia PE, Bui D, Wayhs B, Choe M, Osman G, Naim N, Champion M, Shen J, Irazoqui JE, Olsen CP, Ghazi A bioRxiv 2025-07-18
Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans.
Ratnappan Ramesh, Amrit Francis R G, Chen Shaw-Wen, Gill Hasreet, Holden Kyle, Ward Jordan, Yamamoto Keith R, Olsen Carissa P, Ghazi Arjumand PLoS Genet IF: 0.000 2016-01-29
The in vivo dynamics of TCERG1, a factor that couples transcriptional elongation with splicing.
Sánchez-Hernández Noemí, Boireau Stéphanie, Schmidt Ute, Muñoz-Cobo Juan Pablo, Hernández-Munain Cristina, Bertrand Edouard, Suñé Carlos RNA IF: 4.3 2016-08-08
DAF-16 and TCER-1 Facilitate Adaptation to Germline Loss by Restoring Lipid Homeostasis and Repressing Reproductive Physiology in C. elegans.
Amrit Francis Raj Gandhi, Steenkiste Elizabeth Marie, Ratnappan Ramesh, Chen Shaw-Wen, McClendon T Brooke, Kostka Dennis, Yanowitz Judith, Olsen Carissa Perez, Ghazi Arjumand PLoS Genet IF: 0.000 2016-07-19
Functional Consequences for Apoptosis by Transcription Elongation Regulator 1 (TCERG1)-Mediated Bcl-x and Fas/CD95 Alternative Splicing.
Montes Marta, Coiras Mayte, Becerra Soraya, Moreno-Castro Cristina, Mateos Elena, Majuelos Jara, Oliver F Javier, Hernández-Munain Cristina, Alcamí José, Suñé Carlos PLoS One IF: 2.6 2016-06-03

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