ZFX (zinc finger protein X-linked)

symbol:
ZFX
locus group:
protein-coding gene
location:
Xp22.11
gene_family:
Zinc fingers, C2H2-type
alias symbol:
ZNF926
alias name:
None
entrez id:
7543
ensembl gene id:
ENSG00000005889
ucsc gene id:
uc004dbd.3
refseq accession:
NM_003410
hgnc_id:
HGNC:12869
approved reserved:
1988-07-06
Xp22.11

ZFX(锌指X连锁蛋白,Zinc Finger X-linked protein)是一种位于X染色体上的锌指蛋白编码基因,属于锌指蛋白家族(Zinc Finger Protein Family)。锌指蛋白是一类通过锌离子稳定结构的DNA结合蛋白,其典型特征是含有重复的“锌指”结构域(由半胱氨酸和组氨酸残基与锌离子结合形成的指状三维结构),能够特异性识别并结合DNA序列,从而调控靶基因的转录。ZFX在进化上高度保守,与Y染色体上的同源基因ZFY(Zinc Finger Y-linked)具有相似功能。ZFX的主要生物学功能包括参与胚胎发育、干细胞自我更新及细胞增殖调控。其表达产物作为转录因子,通过结合特定DNA区域激活或抑制下游基因(如多能性相关基因OCT4、NANOG)的表达,尤其在维持胚胎干细胞(ES细胞)和多能性中起关键作用。ZFX的作用位点主要集中在细胞核内,通过调控细胞周期相关基因(如CCND1)影响细胞增殖。若ZFX发生功能丧失性突变(如无义突变或移码突变),可能导致胚胎发育异常或干细胞分化障碍;而某些错义突变可能改变其DNA结合能力,引发转录调控紊乱。研究发现ZFX与多种癌症(如白血病、肝癌)相关,其过表达可通过激活Wnt/β-catenin等促增殖信号通路加速肿瘤发生,还可能通过抑制凋亡基因(如BAX)促进细胞存活。相反,ZFX表达降低会导致干细胞多能性丧失和增殖减缓。在基因家族层面,锌指蛋白家族的共性是通过锌指结构域实现核酸结合或蛋白质互作,广泛参与转录调控、染色质重塑等过程。ZFX过表达会上调下游靶基因(如MYC)并增强干细胞特性,而敲低其表达则可能引发分化相关基因(如GATA4)的异常激活。需要注意的是,ZFX的X染色体定位使其在性别相关疾病中可能具有差异化影响,例如在X染色体失活逃逸(X-inactivation escape)情况下,女性细胞中可能出现双等位基因表达异常。

ChineseEnglish

This gene on the X chromosome is structurally similar to a related gene on the Y chromosome. It encodes a member of the krueppel C2H2-type zinc-finger protein family. The full-length protein contains an acidic transcriptional activation domain (AD), a nuclear localization sequence (NLS) and a DNA binding domain (DBD) consisting of 13 C2H2-type zinc fingers. Studies in mouse embryonic and adult hematopoietic stem cells showed that this gene was required as a transcriptional regulator for self-renewal of both stem cell types, but it was dispensable for growth and differentiation of their progeny. Multiple alternatively spliced transcript variants encoding different isoforms have been identified, but the full-length nature of some variants has not been determined. [provided by RefSeq, May 2010]

Nucleotide sequence of ZFX:[NCBI]
Loading Gene Browser...
Protein Sequence
1MDEDGLELQQ EPNSFFDATG ADGTHMDGDQ IVVEVQETVF
41VSDVVDSDIT VHNFVPDDPD SVVIQDVIED VVIEDVQCPD
81 IMEEADVSE TVIIPEQVLD SDVTEEVSLA HCTVPDDVLA
121SDITSASMSM PEHVLTGDSI HVSDVGHVGH VGHVEHVVHD
161S VVEAEIVT DPLTTDVVSE EVLVADCASE AVIDANGIPV
201DQQDDDKGNC EDYLMISLDD AGKIEHDGSS GMTMDTESEI
241DP CKVDGTC PEVIKVYIFK ADPGEDDLGG TVDIVESEPE
281NDHGVELLDQ NSSIRVPREK MVYMTVNDSQ PEDEDLNVAE
321IAD EVYMEV IVGEEDAAAA AAAAAVHEQQ MDDNEIKTFM
361PIAWAAAYGN NSDGIENRNG TASALLHIDE SAGLGRLAKQ
401KPKK RRRPD SRQYQTAIII GPDGHPLTVY PCMICGKKFK
441SRGFLKRHMK NHPEHLAKKK YRCTDCDYTT NKKISLHNHL
481ESHKL TSKA EKAIECDECG KHFSHAGALF THKMVHKEKG
521ANKMHKCKFC EYETAEQGLL NRHLLAVHSK NFPHICVECG
561KGFRHP SEL KKHMRIHTGE KPYQCQYCEY RSADSSNLKT
601HVKTKHSKEM PFKCDICLLT FSDTKEVQQH ALIHQESKTH
641QCLHCDH KS SNSSDLKRHI ISVHTKDYPH KCDMCDKGFH
681RPSELKKHVA AHKGKKMHQC RHCDFKIADP FVLSRHILSV
721HTKDLPFR C KRCRKGFRQQ SELKKHMKTH SGRKVYQCEY
761CEYSTTDASG FKRHVISIHT KDYPHRCEYC KKGFRRPSEK
801NQHIMRHHK EVGLP
结构预测来自 AlphaFold DB(UniProt: P17010),颜色表示 pLDDT 置信度(深蓝高、黄橙低)。
SNP variants of ZFX:           Showing partial SNPs
rs3761639       rs3761640       rs3838208       rs6526373       rs11795835       rs34848343       rs73474140       rs78155031       rs112380861       rs113207918       rs139447985       rs140372953       rs142707879       rs181789028       rs182414125       rs184087956       rs184894370      

Tissue expression of ZFX:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TTTGATGCAACAGGAGCTG
59
GCACAGTTATGTCTGAATCCA
59
ACAGTCCTGTGAGATTCAGAG
59
TTCTGGTGCAATATACCACCA
60
CTACCTTATGATTTCCTGTGGA
57
TGATCAAGCAGTTCAACTCC
58
TGATTTCCTTGGATGATGCTG
59
GATCAATTTCCGACTCTGTGTC
60
CATAGATGAGTCTGCTGGC
58
CAGGGCCAATAATTATTGCTG
58
ATGCAACAGACAGGGTCTC
60
AGCAGATCACTTGAGCCTG
60
TGACTTAGGTGGAACTGTAGAC
59
CTGCTGTTCTGATCAAGCAG
59
TGGGCTTGAATTACAACAAGAG
59
TGTGTACCATCAGCTCCTG
59
TCAGTAAACACTGGGAAAGAC
58
TGAACATCCACTGTTGCTG
58
TAAGGTGCTTTCGATGCAG
58
CTTCCTTTATTCAGATACTCGGG
59
      No data available

Subcellular localization of ZFX (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for ZFX:

GO ID
Protein
Source DB
GO:0003677
C9J682 (UniProtKB)
IEA
GO:0005634
C9J682 (UniProtKB)
IEA
GO:0006355
C9J682 (UniProtKB)
IEA
GO:0046872
C9J682 (UniProtKB)
IEA
GO:0003677
E9PEP7 (UniProtKB)
IEA
GO:0005634
E9PEP7 (UniProtKB)
IEA
GO:0006355
E9PEP7 (UniProtKB)
IEA
GO:0046872
E9PEP7 (UniProtKB)
IEA
GO:0000977
P17010 (UniProtKB)
IBA
GO:0003677
P17010 (UniProtKB)
TAS
GO:0003700
P17010 (UniProtKB)
IBA
GO:0003713
P17010 (UniProtKB)
TAS
GO:0005634
P17010 (UniProtKB)
IEA
GO:0006351
P17010 (UniProtKB)
IEA
GO:0006355
P17010 (UniProtKB)
IBA
GO:0007275
P17010 (UniProtKB)
IBA
GO:0046872
P17010 (UniProtKB)
IEA

microRNAs potentially regulating ZFX:     

String
IntAct
mentha
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Carcinogenesis 0.001085767 4 0 BeFree
Malignant neoplasm of stomach 0.000814326 3 0 BeFree
Glioma 0.000814326 3 0 BeFree
Stomach Carcinoma 0.000814326 3 0 BeFree
Non-Small Cell Lung Carcinoma 0.000814326 3 0 BeFree
Secondary malignant neoplasm of lymph node 0.000542884 2 0 BeFree
Laryngeal Squamous Cell Carcinoma 0.000542884 2 0 BeFree
Malignant neoplasm of gallbladder 0.000542884 2 0 BeFree
Squamous cell carcinoma of tongue 0.000542884 2 0 BeFree
Gallbladder Carcinoma 0.000542884 2 0 BeFree
Species delimitation based on phylogenetic analyses of males: A case study revealing the complex evolutionary history of giraffes.
Hassanin A, Jullemier E, Chardonnet B, Robinson TJ Mol Phylogenet Evol IF: 4.0 2026-05-00
The Y Chromosome is a Reliable Marker for Deep-Time Phylogenetic Inference.
Alexander EP, Foley NM, Murphy WJ Syst Biol IF: 6.2 2026-07-22
Tightening the Sphincter on Faecal Sample Anonymity: The Case of the Weddell Seal (Leptonychotes weddellii).
van den Hoff J, Fanson KV, Polanowski A, Wotherspoon S Zoo Biol IF: 1.5 2026-06-06
Single-cell multiomics gene regulatory landscape reveals impaired spermatogonial stem cells and macrophage-driven inflammaging during testicular aging.
Lin N, Zhang Z, Sha X, Yao J, Sun X, Sun R, Yang J, Yu Q, Wu Z, Guan J, Mo C, Ouyang B, Xie Y J Genet Genomics IF: 7.9 2026-05-20
Transcriptional mechanisms of sex-biased gene expression and their connections to disease-associated variation.
Jones AG, Dalapati T, Connelly GG, Wang L, Schott BH, San Roman AK, Ko DC Hum Mol Genet IF: 3.1 2026-03-23
Systematic identification of single transcription factor perturbations that drive cellular and tissue rejuvenation.
Sengstack J, Zheng J, Aghayev T, Bieri G, Mobaraki M, Lin J, Deng C, Villeda SA, Li H Proc Natl Acad Sci U S A IF: 9.5 2026-01-13
De Novo Heterozygous ZFX Frameshift Variant in a Female With an X-Linked Neurodevelopmental Disorder.
Showpnil IA, Daley A, Sites ER, Plourde SM, Hunter JM, Bartholomew DW, Lehman AN, Koboldt DC, Stottmann RW Am J Med Genet A IF: 1.7 2026-02-00
Pitavastatin overcomes multi-drug resistance in CRC and NSCLC by targeting the NRP1-ZFX axis.
Zhai YY, Wang Q, Nong QY, Gao MY, Zhang Y, Xiao QW, Tian Y, Zhang ZJ, Xu FG, Zhang P Biochem Pharmacol IF: 6.5 2025-11-00
Association of germline variants in the ZFX gene with primary hyperparathyroidism.
Aranaga-Decori AC, González P, Gómez-Conde S, Madariaga L, Valdes N, Castaño L, García-Castaño A, Calcium and Phosphorus Metabolism Molecular Biology Group PLoS One IF: 2.6 2025-00-00

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