Home LiteratureArticle Details
PMID: 27425854 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Genomic characterization of recurrent high-grade astroblastoma.

Cancer genetics ·Vol. 209 ·No. 7-8 ·2016-00-00 ·页码 321-30

Bale TA, Abedalthagafi M, Bi WL, Kang YJ, Merrill P, Dunn IF, Dubuc A, Charbonneau SK, Brown L, Ligon AH, Ramkissoon SH, Ligon KL

Abstract

Astroblastomas are rare primary brain tumors, diagnosed based on histologic features. Not currently assigned a WHO grade, they typically display indolent behavior, with occasional variants taking a more aggressive course. We characterized the immunohistochemical characteristics, copy number (high-resolution array comparative genomic hybridization, OncoCopy) and mutational profile (targeted next-generation exome sequencing, OncoPanel) of a cohort of seven biopsies from four patients to identify recurrent genomic events that may help distinguish astroblastomas from other more common high-grade gliomas. We found that tumor histology was variable across patients and between primary and recurrent tumor samples. No common molecular features were identified among the four tumors. Mutations commonly observed in astrocytic tumors (IDH1/2, TP53, ATRX, and PTEN) or ependymoma were not identified. However one case with rapid clinical progression displayed mutations more commonly associated with GBM (NF1(N1054H/K63)*, PIK3CA(R38H) and ERG(A403T)). Conversely, another case, originally classified as glioblastoma with nine-year survival before recurrence, lacked a GBM mutational profile. Other mutations frequently seen in lower grade gliomas (BCOR, BCORL1, ERBB3, MYB, ATM) were also present in several tumors. Copy number changes were variable across tumors. Our findings indicate that astroblastomas have variable growth patterns and morphologic features, posing significant challenges to accurate classification in the absence of diagnostically specific copy number alterations and molecular features. Their histopathologic overlap with glioblastoma will likely confound the observation of long-term GBM "survivors". Further genomic profiling is needed to determine whether these tumors represent a distinct entity and to guide management strategies.

Keywords
Astroblastoma GBM NGS SETD2 aCGH
MeSH 主题词
Adult Brain Neoplasms/genetics,pathology Comparative Genomic Hybridization DNA Mutational Analysis Female Gene Dosage Genome-Wide Association Study/methods High-Throughput Nucleotide Sequencing Humans Male Middle Aged Neoplasm Recurrence, Local/genetics,pathology Neoplasms, Neuroepithelial/genetics,pathology Sequence Analysis, DNA
作者与单位
共 12 位作者,点击展开单位 / ORCID
Bale Tejus A
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Abedalthagafi Malak
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA; Department of Pathology, King Fahad Medical City, Riyadh, Saudi Arabia.
Bi Wenya Linda
Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Kang Yun Jee
Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA.
Merrill Parker
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Dunn Ian F
Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Dubuc Adrian
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Charbonneau Sarah K
Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA.
Brown Loreal
Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA.
Ligon Azra H
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Ramkissoon Shakti H
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA.
Ligon Keith L
Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Center for Molecular Oncologic Pathology, Dana Farber Cancer Institute, Boston, MA, USA. Electronic address: keith_ligon@dfci.harvard.edu.
Article Info
Journal
Cancer genetics
Abbr.
Cancer Genet
ISSN
2210-7762
Corresponding email
Published
2016-00-00
电子出版
2016-00-21
页码
321-30
Language
English
Country/Region
United States
NLM ID
101539150
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com