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PMID: 27957397 Published · epublish English

Validation of internal reference genes for relative quantitation studies of gene expression in human laryngeal cancer.

PeerJ ·Vol. 4 ·0000-00-00

Wang Xiaofeng, He Jinting, Wang Wei, Ren Ming, Gao Sujie, Zhao Guanjie, Wang Jincheng, Yang Qiwei

Abstract

The aim of this study was to determine the expression stabilities of 12 common internal reference genes for the relative quantitation analysis of target gene expression performed by reverse transcription real-time quantitative polymerase chain reaction (RT-qPCR) in human laryngeal cancer.,Hep-2 cells and 14 laryngeal cancer tissue samples were investigated. The expression characteristics of 12 internal reference gene candidates (18S rRNA, GAPDH, ACTB, HPRT1, RPL29, HMBS, PPIA, ALAS1, TBP, PUM1, GUSB, and B2M) were assessed by RT-qPCR. The data were analyzed by three commonly used software programs: geNorm, NormFinder, and BestKeeper.,The use of the combination of four internal reference genes was more appropriate than the use of a single internal reference gene. The optimal combination was PPIA + GUSB + RPL29 + HPRT1 for both the cell line and tissues; while the most appropriate combination was GUSB + RPL29 + HPRT1 + HMBS for the tissues.,Our recommended internal reference genes may improve the accuracy of relative quantitation analysis of target gene expression performed by the RT-qPCR method in further gene expression research on laryngeal tumors.

Keywords
Expression stability Housekeeping gene Human laryngeal cancer Normalization Reverse transcription quantitative polymerase chain reaction
Article Info
Journal
PeerJ
Abbr.
PeerJ
Published
0000-00-00
Indexed
2016-12-13
Updated
2016-12-13
Language
English
Country/Region
United States
NLM ID
101603425
External Links
PubMed source
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