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PMS2 or PMS2CL? Characterization of variants detected in the 3' of the PMS2 gen…

Bouras(A),Lefol(C),Ruano(E),Grand-Masson(C),… Genes Chromosomes Cancer 2024-00-00

...PMS2CL which shares a high sequence homology with PMS2. Consequently, short-fragment screening strategies (NGS, Sanger) ...

Open-Source Bioinformatic Pipeline to Improve PMS2 Genetic Testing Using Short-…

Munté(E),Feliubadaló(L),Del Valle(J),Gonzále… J Mol Diagn 2024-08-00

...PMS2CL pseudogene. Next-generation sequencing short reads cannot be mapped unambiguously by standard pipelines, compromi...

Misclassification of a frequent variant from PMS2CL pseudogene as a PMS2 loss o…

Segura(AVC),da Silva(SIO),Santiago(KM),Brian… Fam Cancer 2024-11-00

...PMS2CL pseudogene that has been incorrectly assigned to PMS2 with different nomenclatures. We reviewed data from 647 Bra...

Evaluation of pathogenic variants detected in high homology regions of the PMS2…

Paixão(D),Lima(THA),de Souza(RRF),Carnavalli… Front Oncol 2024-00-00

...PMS2CL pseudogene presents high homology with PMS2, challenging molecular diagnosis by next-generation sequencing (NGS)....

Variant Detection in 3' Exons of PMS2 Using Exome Sequencing Data.

Mistry(NA),Roellinger(SE),Manninen(MC),Gandh… J Mol Diagn 2024-09-00

...PMS2CL, and is often supplemented by long-range-based approaches, such as long-range PCR or long-read-based next-generat...

PMS2CL interference leading to erroneous identification of a pathogenic PMS2 va…

Cappadocia(J),Aiello(LB),Kelley(MJ),Katona(B… Genet Med Open 2024-00-00

...PMS2CL pseudogene. PMS2 c.2523G>A p.(W841∗), when identified, is typically an African-ancestry-specific PMS2CL pseudogen...

Pathogenicity Reclassification of Genetic Variants Related to Early-Onset Breas…

Gervas(P),Molokov(A),Babyshkina(N),Kiselev(A… Asian Pac J Cancer Prev 2022-06-01

...PMS2CL, PTEN, RAD50, RAD51C, RAD51D, STK11, TP53, and XRCC2. Paired-end sequencing (2 x 150 bp) was conducted using Next...

New germline mutations in BRCA1, ATM, MUTYH, and RAD51D genes in Tuvans early-o…

Gervas(P),Molokov(A),Ivanova(A),Panferova(Y)… Exp Oncol 2021-00-00

...PMS2CL, PTEN, RAD50, RAD51C, RAD51D, STK11, TP53 and XRCC2). Next-generation sequencing was performed using the Illumina...

PB-Motif-A Method for Identifying Gene/Pseudogene Rearrangements With Long Read…

Stephens(Z),Milosevic(D),Kipp(B),Grebe(S),Iy… Front Genet 2021-00-00

...PMS2CL using simulated reads sweeping over a range of sequencing error rates. We then apply PB-Motif to 26 clinical samp...

Reclassification of a frequent African-origin variant from PMS2 to the pseudoge…

Chong(AS),Chong(G),Foulkes(WD),Saskin(A) Hum Mutat 2020-00-00

...PMS2CL. This result is not only important for patients but also highlights a weakness in short-read NGS technologies and...

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